Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418030
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Entry
139418030 CDS
T10872
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139418030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139418030
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139418030
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
BNR_2
SNAPC3
Motif
Other DBs
NCBI-GeneID:
139418030
NCBI-ProteinID:
XP_071023227
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Position
10:13463390..13508218
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AA seq
374 aa
AA seq
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MPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPDSKAAQGDLCPGDTILAINGDSTETM
THMEAQNRIKACTGELTLAVSRCEDKVWSPTVIEDGKTSPFMATLESESPQNFRPISTGP
ITGGYISGYSSGHNGSGYSRKPSYISEAPHLNNGTSKQLNNMQYNNPAGLYAHNNGSNGD
RVLPKQMGSLSLSSPHSPEPPTHSPLGRNGNGPSFEVTTESDVYKMLQDPEEPASAPKQS
GSFKYLQGILEAEDGGVSPTDRSGVRSLRSPVQSPVPKLGSPIPGPMGPMPGLQKLPQCT
RCGNGIVGTIVKARDKLYHTECFMCDDCGLNLKQRGYFFIEENLYCETHAMARVQPPEGY
DVVAVYPNSKVELV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccgtgacactgaagggaccctcaccttgggggtttcgactggtcggtgga
agggactttagtactccgttaactatttcgagggtaacaccggacagtaaggcagcacag
ggggacctgtgtcctggggacaccatcctggccatcaatggcgacagcacagagaccatg
acccacatggaggcccagaacaggatcaaggcctgcacgggggagctcacactggccgtc
agcaggtgtgaagacaaagtctggtctccaactgttattgaagatggcaagaccagtcca
ttcatggctacgttggagtctgagtccccacagaatttccgaccaatcagcactggacca
atcaccggtggatacatcagtggctacagcagcggtcacaacggcagtggatacagccga
aaaccctcctacatctccgaggcgccgcacctcaacaacggcacctccaagcagctcaac
aacatgcagtacaacaacccagccggcctgtacgcacacaacaatggcagcaatggagac
agagtcttgccaaaacaaatgggcagcctgagtctgagctccccacacagccctgagcct
ccgacgcattctcctctgggacgtaatgggaacggtcctagttttgaagtcaccacagag
tcagacgtgtataagatgctgcaggacccagaggagccagcctctgcacccaaacagtcc
ggctccttcaaatacctacagggcatactggaggcagaggatggaggtgtgtcccccact
gacaggtctggagtgagaagcctaaggtcccccgttcaatccccagtccctaaattgggc
agccccattcctggtcccatgggccccatgccaggcctacagaaactcccccagtgcacg
cgctgtggcaacggcatagtgggcaccatcgtgaaggccagagacaaactgtaccacaca
gagtgcttcatgtgtgatgactgcggcctgaacctcaagcagaggggctacttcttcatt
gaggagaacctgtactgtgagacccacgccatggcccgtgtccagcctcctgagggatat
gacgtggttgcagtctaccccaattccaaggttgaactggtctga
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