KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418032
Entry
139418032         CDS       T10872                                 
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061  Fatty acid biosynthesis
ocla00071  Fatty acid degradation
ocla01100  Metabolic pathways
ocla01212  Fatty acid metabolism
ocla03320  PPAR signaling pathway
ocla04146  Peroxisome
ocla04216  Ferroptosis
ocla04920  Adipocytokine signaling pathway
Module
ocla_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    139418032
   00071 Fatty acid degradation
    139418032
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    139418032
  09143 Cell growth and death
   04216 Ferroptosis
    139418032
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139418032
   03320 PPAR signaling pathway
    139418032
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ocla01004]
    139418032
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139418032
Enzymes [BR:ocla01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     139418032
Lipid biosynthesis proteins [BR:ocla01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   139418032
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139418032
  Exosomal proteins of breast cancer cells
   139418032
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 139418032
NCBI-ProteinID: XP_071023229
LinkDB
Position
10:13629776..13721635
AA seq 723 aa
MLAFVLISGSIWIILELSSTLMERMQTQELQSSLQLPELDELNQFFRSLPISTLVGIGAL
TAVLAYWLATRPRAISPPCNLQHQSEEVAHEDGVRRSMLGDSPNNLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPEKPYKWLSYKEVTNRAEYLGSGLLSQGCTPCPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIVTVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDPALLEEGAGCGVIVQSMQDVEDLGRENHRKPLPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIQSVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSRGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFARKGEGEVCVKGPNV
FKGYLKDPERTAETLDTDGWLHTGDIGRWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIHIHNEQFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgcttgccttcgttctgatctctgggtctatctggattatattagagctgagttccacc
ctgatggagaggatgcagacccaggagctgcagagcagtctacagctgccagagctggat
gagttaaaccagttcttccgctccctgcccatctccacactggtgggcatcggtgccctg
accgccgtgctggcctactggctggccacacggccacgtgccatctctcctccctgcaat
ctccaacaccagtctgaagaagtggcgcatgaagatggggttcgcaggtccatgctgggg
gacagccccaataatctgctgacacactaccacgaggatgccaaaaccatgtatgaggtg
ttccagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccgaa
aagccttacaagtggctgtcctataaagaggtcacaaaccgggcggagtacttggggtcg
gggctgctgagccagggctgcacgccgtgcccagatcagttcatcggagtgtttgcacag
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacgctacatcatcaacactgcggacatc
gtcacagtaatctgtgacaagcctgagaaggcccaggtgcttttgggtaatgtggagagg
caggagacccctgggctgaagaggatcatcctgatggacccctttgatcctgccctgctg
gaggagggggcgggctgcggggtcatcgtccagtccatgcaagatgtggaggatctgggc
agagagaaccacagaaagcccctgccacctacaccagaagatctgtccattgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacacgggaatgttgtggct
gatttctcaggcttcctcaaagtgacagataaagtaatattcccaaaccaagatgacgtt
cttatctccttcctgcctctggcgcacatgtttgaaagactcatccagtctgtggtgtat
tgtcacggtggccggatcggtttcttccaaggcgacatccgcctgttgtctgatgacatg
aaggctttacggcccaccatcttccctgtggtacctcgactgctcaaccgcatgtacgac
aagatattcagccaggccaacaccccattgaagcgttggctgctgaactttgcagctaag
agaaaaggggcagaggtcagcagggggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgcatgattgtaactggagct
gcgccggcctcccccactgtactggggtttctcagggctgcactgggttgtcaggtgtat
gaggcgtatggccagacagagtgtactgctggttgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccattgccatgtaacctcatcaagctggtggatgtggct
gagaagaactactttgcacgcaagggagaaggagaggtgtgtgtgaaaggacccaatgtt
ttcaagggctacctcaaagaccctgagaggactgctgaaaccctggacacagacggttgg
ctccacaccggagacatagggagatggttacctaacggtacactgaagatcattgacagg
aagaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagcctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcatgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgtcctgaagaaagccatcatg
gaagacttgcagagactgggcaaggccagtggcctccactcgtttgagcaggtgaaaaac
atccacatccacaacgagcagttctccatacagaatggcctgttgactcccacactaaaa
gcgaagagacccgagctgagggagtttttcaaggagaagatcgaagacctgtacgaaaac
atctccatgtga

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