Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418039
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Entry
139418039 CDS
T10872
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K02620
transcription factor 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04520
Adherens junction
ocla04916
Melanogenesis
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139418039
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139418039
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139418039
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139418039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139418039
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
139418039
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139418039
NCBI-ProteinID:
XP_071023241
LinkDB
All DBs
Position
10:14593780..14667734
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AA seq
385 aa
AA seq
DB search
MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETNQSSNA
AAVRRSQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYLPNGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSNLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
MPPSGKLDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKES
AAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRGCAGEKSKA
DWGKKKRRKREKQQDSSADNSLDCS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagttcgaacgca
gcggcggtcagacgaagtcagcaaaacgaacatagaggttatcaagagaaacaccgggag
catctcgacagcgtgtccaaacatcaagatggagggatgtataaaacagcgtatccaggg
tacccgtttctcatgctgcctgacccatacctccccaacggatccgtttccccatcttcc
aacaaagtttcagtggtccaacagtctcacgggatgcaccccctgacgtccctgctgccc
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaa
ggcgttcacaggccccagtcccaggacatctcaggtttctactccctaccccctggcggt
gtaggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccaatctccccaacagctcttcctaccccaggttc
tctcactctctgatgctggggccaggcatgcaccccacggggatcccccacccagccatc
atgcccccttcaggcaaactggaccattacgacaggaacatgtacgctaagcctcaccag
gagcccaagcgggagaaggagcccaagaagccggtgatcaagaagcctctgaatgctttc
atgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacactgaaggagagc
gctgccatcaaccagatactgggccgaaggtggcacgccctgacccgggaggagcaggcc
aagtactatgagctggccaggaaggagcggcagctacacatgcaactctaccccagctgg
tccgccagagacaactatgatgcaggccttagagggtgcgcgggggaaaagagtaaagct
gattggggcaagaagaagagaagaaaaagagagaagcagcaggactcctcagcagataac
tctcttgactgttcctag
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