Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418045
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Entry
139418045 CDS
T10872
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139418045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418045
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
139418045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
139418045
NCBI-ProteinID:
XP_071023255
LinkDB
All DBs
Position
10:14983218..15007188
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AA seq
1135 aa
AA seq
DB search
MSSTGFNFQNGPGGQPYANGPLQNQVVLQPPGPGYNMAHQPPYNPMQAKGPMPPGPGLYN
SGPYQPIPPVSSYQASPGQPMLNRPPMGPLHPMTPPQSTSPCPGLRMPPAQVTPALPVSA
NSYYQHPPAWQYGALPLMGAPPPMGAPPPMATPPLAFVDNHVTSSPNLAPLQAPSAGYSA
APSPVYHNAMQPSGPPLPPTSLHRSTQPGSAPPPMNPVAAPHTYQPGMTAPYGHPPTGPT
PSMRPTPPPMGNATPPLPFGPKTDAQCGSDASDDAAHTEYDNQENDIECPGHIPTPANGA
QVPNSFDHLETSPKMAGPPQQPAPPVRHMGLSYPSLPPGYQNTSASPMQAQTQPYSHAPQ
SYQQPSAGPAQLSPSLAGLSLQSQTPETLRVVNLLQERNLLPPGPITPPTPCLPQDLQKI
NCHPEVFRSTLTNIPQTQSLLNKAKLPLGLLLHPFKDLSQLPVVTSSTIVRCRSCRTYIN
PFVTFLDQRRWKCNLCYRVNDVPEEFMYNPVTRSYGEPHKRPEVQNATIEFIAPSEYMLR
PPQPAVYLFVLDVSHNAVETGYLDVVCQSLLENINALPGDSRTKIGFISFDSTIHFYNLQ
EGLAQPQMLIVSDIEDIFLPTPDSLLVNLNECKELVQDLLKSLPQMFGKTMETQSALGPA
LQAAFKLLSPTGGRVSVFQTQLPKLGVGALKSREDPNQRASAKDIPNLSPATDFYKKLAL
DCSGQQVAVDLFLLSSQYCDLASLACISRYSAGSVYYYPSYQQQHNPAGVECFQKDLKRY
LTRKIGLEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGFAVQMSIEENLVDM
QSVSFQAALLYTSSKGERRIRVHTMCLPVVNSLSDIFAGADVQAITGLLASMAVDRSVTS
SLSDARDAMTNASIDSLTSYRTSVLTIQQPGLLAPACLRLFPLYILALLKQKAFRTGTST
RLDDRVFAMCQLKYQPLAYVMLMIHPALYRVDDLTDEGALNISERAIPQPRVQQLSVEKL
SREGAFLMDAGSVIYIWIGRNCNPNFLTQVLGVPDYAAVPQNMNLLPELDTAESQRTRAF
VGWLREQRPFFPILHVIRDESPLKASFMQNMIEDRTESALSYYEFLLHVQQQVSK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtacggggttcaactttcagaatggaccaggaggacagccatacgcaaatggt
cccttacagaatcaagtagtgctgcagccaccaggaccgggttacaacatggcccaccag
cctccatacaacccaatgcaagccaagggccccatgccgcctggccctggactctataac
tctgggccctaccagcccatcccaccagtcagctcttaccaggcctccccaggtcagccc
atgttaaacaggcctcctatgggacctctccaccccatgacgccccctcaatccaccagc
ccttgcccaggcctcaggatgcccccagcgcaggtcacccctgctctacctgtgtctgct
aacagctactaccagcaccccccagcctggcagtatggggcccttccactgatgggagct
cctccaccaatgggggcgccgcctcctatggccactcctcccctcgcgtttgtggataat
cacgtgacctcctcgcctaacttggcaccactccaggccccctcggcggggtacagcgct
gctccttctcctgtctaccacaacgccatgcaaccctcgggtcctcccttgcctcctacc
tccctccacagatccacccagccaggctctgcccctcctccaatgaaccctgtggctgct
cctcacacataccagccaggaatgacagcaccttacggccacccacctacaggacccaca
ccctcgatgagacccactccaccccccatgggcaatgctacccctccccttccctttggc
cccaagactgatgctcagtgtgggagtgatgctagtgatgatgctgcccacactgagtac
gacaaccaggagaatgatattgagtgtccaggacacatacccacacctgccaatggcgct
caagttcccaacagctttgatcacttggagacaagccctaaaatggctggcccaccccag
cagccagccccccctgttcgacacatgggtctgtcctacccctctttacccccagggtac
cagaacacctccgcctcccccatgcaggcccagacgcagccttacagccatgcacctcag
tcataccagcagccgtctgcaggtccagcccagctgagcccctccctggctggtttgagt
ctgcagtcccagacccctgagaccctgagggtggttaacctgctgcaggagaggaacctg
ctccccccgggccccatcacccctcctacaccctgcctgccccaggacctgcagaaaatc
aactgtcacccagaggtattccgcagtaccctgaccaacatcccccagacccagtctctg
ttaaacaaagccaagcttccactcggcttgctgctccaccccttcaaagatctctcgcaa
ctgcctgtggtcacctccagcactatagtgcggtgtcgctcctgcaggacatatatcaac
cccttcgtgaccttcctggaccagaggagatggaagtgtaacctgtgctaccgggtcaac
gacgttccagaggaattcatgtacaacccagtcaccagatcgtacggagagccacacaaa
agacctgaggtccagaacgccaccatcgagttcatcgcaccctcagaatacatgctgaga
cccccccaacctgccgtttatctcttcgtgctggatgtatcccacaacgccgtggaaaca
ggatacctagatgtcgtctgtcagtcactgctggagaacatcaacgcgctccctggagac
tccaggacaaagattggcttcatctcctttgacagcaccatccacttctacaacctccag
gaaggcctggcccaaccacagatgctcatcgtctcggacattgaagatatatttttacca
acaccagacagccttttagtgaacctcaatgaatgcaaggagctggtgcaggatctgctg
aagagcttgccccagatgtttggcaagaccatggagacccagtctgctctgggcccggcc
ctgcaggcagccttcaagctgctgtcgcccaccggggggcgcgtgtccgtcttccagacc
cagctgcccaaactgggcgtgggggccctcaagtccagagaggaccccaaccagagagct
tcagccaaggatatcccgaacctgtctcctgccacagacttctataagaagctggccctg
gactgttcaggacagcaggtggctgtggacctattcctactgagctcccagtactgtgac
ctggcctctttagcttgcatatccaggtactcagcaggaagtgtgtactactacccctca
taccagcagcagcacaacccagccggggttgagtgcttccagaaggatctcaagaggtac
ctcaccaggaagattggcttggaggctgtaatgaggatccgctgcactaaaggtttgtcc
atccacacgttccatgggaacttctttgtgcgctccacggatctgctgtccctgcccaat
gtgaacccagacgcgggctttgctgtgcagatgtccattgaggagaacctggtggacatg
cagtccgtctccttccaggctgcgctgctctacacatccagcaaaggagagagaagaatt
cgagtccacaccatgtgtttgcctgttgtcaactccctgtcggacatctttgctggggct
gatgtccaggccatcactggtctgctggctagcatggctgtggatcgctcggtgacgtcc
agtttgagtgacgcccgggacgcgatgaccaacgcttccattgactctctgacatcctac
cgcacctctgtgctcactatccagcagcctggcctcctggcccccgcctgcctcaggctg
ttccccctctacatcctggccctgctcaaacagaaagccttccgaactggtacaagcacc
aggctggacgaccgtgtgtttgccatgtgtcagctgaagtaccagcccctggcctacgtc
atgctgatgatccacccagcgctgtaccgcgtagacgacctgactgacgagggagccctg
aacatcagtgagcgtgccatcccccagcccagagtccagcagctgtctgtggagaagctg
agcagagagggggccttcctcatggatgctggctcggtgatctatatctggatcggaaga
aactgcaaccccaacttcctcacgcaagtcctgggggtcccagactacgctgctgtgcct
cagaacatgaaccttctcccagagttggacacggcagagtcccagagaaccagagcgttt
gttggctggctgagggaacagaggccctttttccccatcctgcatgtcattagggatgag
agcccactgaaagccagctttatgcagaacatgattgaggatcggacagagtcggcccta
tcttactatgagtttttactccacgtccaacagcaagtctccaagtaa
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