Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418055
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Entry
139418055 CDS
T10872
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139418055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139418055
03032 DNA replication proteins [BR:
ocla03032
]
139418055
Spliceosome [BR:
ocla03041
]
Complex A
U1 snRNP components
Sm proteins
139418055
U2 snRNP components
139418055
Complex B
U1 snRNP components
139418055
U4/U6.U5 tri-snRNP components
139418055
Complex C
U2 snRNP components
139418055
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
139418055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
139418055
NCBI-ProteinID:
XP_071023309
LinkDB
All DBs
Position
10:complement(15530877..15533692)
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AA seq
121 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKSNTQVLVNCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGTGG
K
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgctgaataaacccaagtctgagatgactccagaagagttgcagaaacgagag
gaggaagaattcaacactggaccactgtctgtgctcacccagtccgtgaaaagcaacaca
caagtcctcgtcaactgccgcaacaacaaaaagctacttggacgagtcaaagccttcgac
aggcactgcaacatggtgttggagaatgtgaaggagatgtggacagaggtcccgaagagt
ggcaaggggaaaaagaagtccaagccagtgaacaaggaccggtacatctctaagatgttt
ctgagaggggactctgtcattgttgtgttgaggaaccctcttatcactgggactgggggg
aagtag
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