KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418103
Entry
139418103         CDS       T10872                                 
Name
(RefSeq) cullin-5-like isoform X1
  KO
K10612  cullin 5
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139418103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139418103
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139418103
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     139418103
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139418103
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 TFC3_eWH
Other DBs
NCBI-GeneID: 139418103
NCBI-ProteinID: XP_071023389
LinkDB
Position
10:19760286..19786493
AA seq 799 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLNAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGCNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNTDDKLQIYRENFEKAYMDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKQNETESEYGRSAPG
TKGSASSELHLMFSLMDKVPSGIEPMLNDLEDHIMSAGLADMMASAETITSDSEKYVEQL
LTLFNSFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKC
PELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLIL
DISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSDDLNQNFKECHKHNKLALSGK
PADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGI
ITFKNEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFP
KLKRQVLFYDPVVGSPKDFAEGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMRE
EENEGIVQLRILRTQEAIIQIMKMRKRITNAQLQTELVEILKNMFLPQKKMIKEQMEWLI
EHKYIKRDETDLNTFLYMA
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgctaaagaacaaaggctccctccagttcgaggacaagtgggac
ttgatgcgtcccatcgtcctcaagctgctccgccaagagtcagtcaccaaacagcagtgg
ttcgacctcttctcagatgtccatgcagtatgcctatgggatgacaaggggccggccaag
attcaccaggcactgaaagaggacatcctagacttcatcaagcaagcacaagcacgggtg
ttgagccaccaggatgacacggcgctgctgaatgcctacatcgttgagtggaggaagttc
ttcactcagtgtgacatcctgcccaaacccttctgccagctggagattacgctcatgggc
aaacagggctgcaacaagaagtctaacgtagaggacagcatcgtacggaagctcatgctg
gacacgtggaacgagtccatcttctccaacatcaagaataggctccaggacagcgccatg
aagctggtgcatgccgagcgcctgggggaggccttcgactctcagctggtcattggtgtc
agggagtcttatgtgaacctgtgctcaaacacggatgacaagttgcagatttacagagag
aactttgagaaggcctacatggactccaccgagaggttctacagaacacaggccccctcc
tacctgcagcagaacggagttcagaactacatgaaatatgcagacgccaagttgagagag
gaggagaaacgggcgctgcgctacttggagacgagacgggaatgtaactctgtacaagca
ctgatggagtgttgcgtgaacgccctggtgacgtcctttaaggagaccatcttggccgag
tgtccaggcatgatcaagcaaaatgagacagagagtgagtacggccggagtgctcctggc
accaaaggctcggccagctcagagctccacctcatgttctctttgatggacaaggtgcct
agtggcatcgaacccatgctgaatgacctagaggaccacatcatgtctgctgggctggcc
gacatgatggcttccgccgagaccatcacctcggactctgagaagtacgtggagcagctc
cttaccctgttcaacagcttcagtaaactggtgaaggatgcctttcaggatgaccctcgc
ttcctcactgccagggacaaggcttacaaagcagttgtgaacgacgctaccatttttaaa
ttagaactcccgctgaagcagaaaggggtgggtctgaagacccagccggagtcaaagtgt
ccagaactgctggccaactactgtgacatgctgctgaggaaaaccccgctcagcaagaaa
ctcacctccgaggagattgaggccaagctcaaggaagtgttgctggtgttgaagtacgtg
cagaacaaagacgtgttcatgcgctaccacaaagcccatctgacgcgacgcctcatcctg
gacatctccgccgacagcgaaatcgaggagaacatggtggagtggctcagggaggtaggc
atgcccgcggactacgtgaataagctggcccggatgttccaggacatcaaggtgtccgat
gatctcaaccagaacttcaaagagtgtcacaaacacaacaagctggccctatcaggtaaa
ccagcggactctgtcaacatcaagatcctgaatgccggggcgtggtctcgaagctcagag
aaggtgtttgtgtcactgcccactgaactggaggatctcatccccgaggtggaggacttc
tacaagaagaaccacagcggcaggaaactgcactggcaccacctcatgtccaatggcatt
atcacctttaagaacgaggtgggacagtacgacctggaggtgaccaccttccagctggca
gtgctttttgcctggaaccagaggccccgggagaggatcagctttgagaacctcaagctg
gccacggagctgcctgacgctgagctccgacgcaccctatggtccctggtagcgttcccc
aagctaaagcggcaggtgttgttctacgaccccgtggtgggctcgcccaaagactttgcc
gagggcacactcttctacgtcaaccaggagttctcactaataaaaaactccaaggtccaa
aagagggggaagatcaacctgattggccggcttcagctcaccacggagcgaatgagggag
gaggagaacgagggaattgtccagctcaggatattgagaacacaggaggccatcatccag
atcatgaagatgaggaagaggatcaccaatgcccagctgcagacggagctggtggagatc
ctcaagaacatgttcctaccccagaagaagatgatcaaggagcagatggagtggctcatc
gagcacaagtacatcaagcgtgacgagactgatctcaacaccttcctctacatggcgtag

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