Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418124
Help
Entry
139418124 CDS
T10872
Name
(RefSeq) homeobox protein otx5-like isoform X1
KO
K18490
homeobox protein OTX2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139418124
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139418124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
139418124
NCBI-ProteinID:
XP_071023435
LinkDB
All DBs
Position
10:complement(20184258..20188501)
Genome browser
AA seq
307 aa
AA seq
DB search
MMSYIKQPHYAMNGLNMPGMDLLHTTAGYPFSVSLDFSATPRKQRRERTTFTRTQLDILE
ALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKTS
PAQDQPSAGPDPSANNPSGSYSPSSAPSGPSLPPSGNNPGNAAVSIWSPAISPLPDPLAS
SAPCMQRPSAYPMSYGQPQAYAQGYAQGYAGTSSYFTGLDCSAYLSPMHSQLSASGALSP
ITVPSMGGSLSQSPASLSSQGYGTAASLGFTSVDCLDYKDQQAWKLGFSTMDCLDHKDQN
SWKFQVL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattacgccatgaacgggttaaacatgcctgggatg
gacctgctacacaccacggctggatacccattctctgtgtctctggatttctcagccacc
ccacgaaagcagcgtcgcgagcgcaccaccttcacacgcactcagctggatatcctggag
gccttgttctccaagacccgctaccccgacatcttcatgagggaggaggtggccctcaag
atcaacctccccgagtcacgcgtacaggtgtggttcaaaaaccgccgcgccaagtgccgc
caacagcagcagcagagcagcggccagtccaagccccgcccgcccaaaaaaaagacgtcg
cccgcccaggaccagcccagcgccggcccagacccctcagccaacaacccctctggttcc
tacagcccctcctcagccccatcgggcccctccctgccgcccagcggcaacaaccctggc
aacgcagcagtctccatctggagcccggccatctcaccactccctgaccctctggcctct
tcggcgccctgcatgcagcggccctctgcctacccgatgagctacggccagccgcaggcc
tacgcccagggctatgcccagggctatgccggcacctcctcctacttcacgggcctggac
tgcagtgcctacctgtcgcccatgcattcgcagctgtcggctagcggtgccctcagcccc
atcaccgtgccctcaatggggggttcgctgagccagtcacccgcctcgctctcctcccag
ggctacggcacggccgcctcgctgggcttcacctccgtcgattgcctggactacaaagac
cagcaggcctggaagctgggctttagcaccatggactgcctggaccacaaagaccagaat
tcctggaagttccaggtgctgtag
DBGET
integrated database retrieval system
