Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418138
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Entry
139418138 CDS
T10872
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139418138
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NCBI-GeneID:
139418138
NCBI-ProteinID:
XP_071023452
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Position
10:20842293..20885510
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AA seq
881 aa
AA seq
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MKGGGRGKEPPVEVSCKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKEPLLVRETRG
PKVPCGGPPEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTRNKVWSFPSNSPK
GCATAKKLPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTK
YPDKSSLFQLAEISSSTRQPSLMDTAGKGKPLSWGDQAEMWSGTSQQGKPDVPTANVKSP
LFQLAEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETQDDTCTPHIKTETVV
EEAGDNTPDLPLSFPPSSSMPTDASLLLLRGQAAIIKRKKDASTREAPKVVDKDKSPGPG
SPKKTLKKRPSSESELESLFYTIEAVAKGAWGDAEEDMPKKKARTAAVTILVESSSPKKR
AKPKAKRPLKAKEDERNVKDKEDDGRTELPLTVETVLNPASPKIEDKEANISSSTEEPTS
PPSPPQIKHKVGERELEANAEGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGS
FRSASDEGGWIDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSP
LTFDKKSTVVTKKTDINTAPEEQPPKPAKGQSPSQKNTLFHKIVSNYKEKKKKPNTLDKD
IAMRNDSPMLDSAAKDTKAKPSPAPCATATLNPEAMGTSPSVPVGSQKRKARKSKITHLV
RSADGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYNASKQEEADRSSAPEDLPAFF
SLAALAEVAAMENIHRGQHVIGDSQKKDMAKTPLLISCADQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctccggtggaggtgagctgcaagcgtcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttcggaggag
gaagaggaggacgaagaagaactagagaaggagccattgttggttagggagacccggggg
ccgaaggtgccatgcggggggcccccggagggggaagaggactcttcagagcagcgggcc
cgccggcccatgaatgccttcctgcttttctgcaagcgccaccgatcgctggtgaggcag
gaacaccctcgactggacaaccgcggtgccaccaagatcttggctgattggtgggccgtg
ctggagcccaaagagaaacagaagtacactgacatggccaaggagtacaaggatgccttc
atgaaggctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccc
tgccacactgtcagcaacacccgcaataaagtgtggtccttcccttccaactcccctaag
ggctgtgccactgccaagaaactgcccaagactgacagcacaccacagcttaatttcgcc
atggcagatcccacgaagatgggtggcctaagcatgctactgttggctggggagcatgcc
cttactgccagagagatttcctccagctcatcacaatctggagccacagatgtcactaag
taccctgataaatcctccctattccaacttgctgagatctcttccagcacgcgtcagccg
agtttaatggacaccgctggcaaagggaagcccttgagttggggggaccaggctgaaatg
tggtctggaacctcacagcagggaaagcctgacgtacccactgccaatgtcaagtcccct
ctttttcaactggcagagcagatctcctctgattcgagccagtcgactgcaccagaggga
aagcagtgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggca
gggaagatggagacacaggacgatacctgcaccccacacatcaaaactgagactgtggta
gaggaggctggggacaacacccctgatcttcctctctcctttcccccgtcttcctccatg
ccgaccgatgctagtctcctgctactcagaggccaagcagccataatcaaaaggaagaaa
gacgccagcaccagagaggcgcccaaagtggtggacaaagacaagagccctggtcccggc
tcacccaaaaagaccctcaagaagcgaccttcatccgagtcagagttggagagcctcttc
tacactatcgaagccgtggctaaaggggcctggggcgatgccgaggaggatatgcccaag
aagaaggctcgcaccgccgccgttaccattctggtagagtccagctcacccaaaaagagg
gccaagcccaaagccaagaggcccctgaaggctaaggaagatgagagaaatgtgaaggac
aaagaggacgacggacgcacagagcttccattgacagtggagacggtgttgaatccagca
agccccaagatagaggataaggaggccaatattagcagcagcacggaggagcccacctcc
cctcccagccccccgcagatcaagcacaaagtcggggagagggaactggaggccaacgca
gaggggtgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagaccctg
gtgtcggaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggttct
tttcgaagtgcatctgatgaaggaggctggattgacgagacctgggctttctcacagatg
ggacccagtaatttcaagaagcttaagaagtccaaatccaaagacgagaccgcgccaggt
ttggggaaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagccct
ctgacattcgacaaaaagagcaccgtcgtcaccaagaaaactgacattaacaccgcaccg
gaggaacaacctccgaaacctgccaagggtcaatctccatctcagaaaaatactttattc
cacaagattgttagcaattacaaggagaaaaagaagaagcccaatactttggataaagac
atagcgatgcgtaatgactcccccatgttagactcggctgccaaggacaccaaggcaaag
ccgagcccagccccctgtgccactgccacgctgaacccagaagccatgggaactagccct
agtgtgccagtgggcagccagaaaaggaaggccaggaagagcaagatcacccacttggtg
cgctcggccgacggcagggtatccccagccgaagaggacaaagccagggacctgaccccg
gagcaggatgacaagccattatcccaagatactttatgcaatgaaacagggtgttacaac
gcatccaagcaagaggaagcggacaggagcagtgcacctgaagacctgcctgccttcttt
agcctggctgcccttgcagaggtggcagccatggagaacattcacagaggccagcatgtg
attggtgacagccagaagaaagacatggccaagacccctttgctcatctcctgcgctgac
caatga
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