Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418140
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Entry
139418140 CDS
T10872
Name
(RefSeq) hypoxia up-regulated protein 1 isoform X1
KO
K09486
hypoxia up-regulated 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139418140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ocla03110
]
139418140
Chaperones and folding catalysts [BR:
ocla03110
]
Heat shock proteins
HSP110
139418140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DNA_pack_N
AbiEi_3_N
Motif
Other DBs
NCBI-GeneID:
139418140
NCBI-ProteinID:
XP_071023462
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Position
10:20935182..20956358
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AA seq
1055 aa
AA seq
DB search
MCQRALSGTTTRVDPMRSRRVLGPMVTMRRKMLWALFCLVLALLPSQTASVAVMSVDLGS
EWMKVAIVKPGVPMEIALNKESRRKTPIAVCLKENERLFGDGALGVSVKNPKFVYRYLQS
LLGKKHDNPQVAFYQKRFSEHQLVKDASRGTVVFRNSEVMQYSPEELLGMVLNYSRGLAQ
DFAEQPIKDAVITVPAFFNQAERRAVLQAAQMAGVKVLQLINDNTAVALNYGVFRRKDIN
STAQNMMFYDMGSGSTTATIVTYQTVKTKDSGTQPQLQIRGVGFDRSLGGFEMDLRLRDH
LAKLFNEQKKTKKDVRENHRAMAKLLKEAQRLKTVLSANAEFMAQVEGLLDEMDFKAKVT
RVEFEALCADLFERVPGPVQEALSSAEMSLDEIEQVILVGGSTRVPKVQEVLLKSVGKEE
LGKNINADEAAAMGAVYQAAALSKAFKVKPFLVREAAVFPIQVEFTRETEDEDGSRSLKH
NKRILFQRMAPYPQRKVITFNRYTDDFAFDINYGDLSFLGQNDLSVFGSLNLTTVQLSGV
SSSFQKHMDAESKGIKAHFNMDESGMLLLDRVESVFETIVEEKDEESTLTKLGNTISSLF
GGGSSEPNANVTEPVQDEEEVPSESGKEQSKKEEAAPQEEKQEPGEKQEEEVPTQEKTKG
EALDSKAYPQEGGKNGVEEEAEKEAAEEKEAAEEKEAAEEKAAAEEKEVAEEEAAGKEEK
DAAAAKKAKPQKRTKFSEDVSVELQVNDILNPSLEAIASSNKKLQDLTDRDLEKQEREKT
LNSLEAFIFETQDKMYQEEYQAVVSEEEKETITTKLSEASAWMDEDGYSAVTKELREKLQ
ELRKLCKAMFFRVEERRKWPDHLAALESMLNHSSFFLRSVKLTPEDDQIFTEVELKTLDR
VINETITWKNDTVAEQEKRSPTERPVLLSKDIESKLSLLDREVHYLLNKAKFAKPRAKAK
ANSTTSESSSKANSTVSESSSKANSSKTEEKVIPPKEETKDKEATKVVQPGEEPPTKEPA
GQNTDSSSQSQPKDETASTESTEKDKSEKHVGDEL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagcgcgctcttagcggaacaacgactcgagtggatccaatgagatcacgccgc
gttctgggccctatggtcaccatgaggaggaagatgttatgggctctcttctgccttgtc
ctggctctgctgccttcacaaaccgcctctgtagcagtcatgtcagttgacctaggcagt
gagtggatgaaagtagcgatagtaaaacctggcgtgccaatggagattgctttaaacaag
gagtccaggaggaaaactccaatagccgtgtgtttgaaagaaaatgagcgactttttgga
gacggtgcattaggagtgtctgtgaagaaccccaaatttgtctataggtatcttcagagc
ctcctaggcaagaagcacgacaatccacaggtggcgttctaccagaaacgtttctccgag
caccaactggtgaaagatgcgagtcggggcacagttgtctttagaaactcggaagtaatg
cagtactctccagaggagctcctgggcatggttttgaactattcacgtggactggctcag
gactttgcagagcagcccatcaaagatgcagtgatcactgtcccagcctttttcaatcag
gcagagcgtagggcggtcctgcaggccgcacagatggcaggtgttaaggttcttcagctc
atcaacgacaacacggcggtggcgctcaactacggtgtcttcaggaggaaagacatcaac
agcacagctcagaacatgatgttctatgacatgggttcaggcagcacaacggcaaccatc
gtcacataccagacggtcaagaccaaagattctggcacccagccacagctccagatccga
ggagtagggtttgaccgctctcttgggggctttgagatggatctgcggctgcgggaccac
ctagccaagctgttcaacgagcagaagaagaccaagaaggacgtgagggagaaccaccgc
gccatggccaagctcctcaaggaggcccagagactcaagacagtgctgagcgccaacgcc
gaattcatggctcaggtggaggggcttctagatgaaatggacttcaaggccaaggtgacc
cgtgtggagtttgaggccctgtgtgctgacctgtttgagagagtgcctggacccgtacag
gaggcccttagctctgcagagatgtccctggacgagattgagcaggtgatcctggtgggc
ggctccacccgagtgcctaaggtgcaggaggtgctgctcaaatccgttgggaaagaggag
ctgggaaagaacatcaatgcagacgaggctgcagctatgggtgctgtgtaccaggccgct
gccctcagcaaggcctttaaagttaaacccttcctggtcagggaggcagctgttttcccc
atccaggtggagttcaccagggagacggaggatgaagatggctccaggagcctgaaacac
aacaagcgtatcctgttccagaggatggccccctacccccagcgcaaggtcatcaccttc
aaccgctacactgatgactttgcctttgacatcaactatggagacctcagcttcttgggc
caaaatgacctcagtgtgtttggctctctcaacctgaccacagtgcagctgtctggggtg
agcagcagcttccagaagcacatggatgctgagtccaagggcatcaaggcccacttcaac
atggatgagagtggcatgctcctcctggaccgggtggagtctgtctttgagaccattgta
gaggagaaggatgaggaatcaactctgacaaaactaggaaataccatttccagcctgttt
ggagggggatcctcagagcccaatgcaaatgtgacggaaccagttcaggatgaggaggag
gttccttcagagtctgggaaggagcagagcaagaaggaggaggctgctccccaggaagag
aagcaggagcctggggagaaacaggaggaggaggtcccaacccaagagaagactaaggga
gaggcattagacagcaaggcttaccctcaggagggaggaaaaaatggagtggaggaggag
gcggagaaggaggcggcggaggagaaggaggcggcggaggagaaggaggcggcggaggag
aaggcggcggcggaggagaaggaggtggcggaggaggaggcggcggggaaggaggagaag
gacgcagcggcggcgaagaaagccaagcctcagaagagaaccaagttctctgaagatgtc
tcagtggagctccaagtgaacgacatcctgaaccctagcttggaagctatcgcctcctca
aacaagaagctccaagacctgactgatagagacctggagaagcaggagagggagaagacc
ctgaacagccttgaggcattcatttttgagacccaggacaagatgtaccaggaggagtac
caggcggtggtgtcagaggaggagaaggagaccatcacgacgaagctgagcgaggcgtcg
gcctggatggatgaggatggctactctgcagtcaccaaggagctgcgggaaaagctgcag
gagctcaggaaactgtgcaaggccatgttcttccgtgtggaggagcgcaggaagtggccc
gaccacctggccgccctggagagcatgctcaaccactccagcttcttcctcaggagcgtc
aaactaacaccagaggacgaccaaatcttcaccgaagtggagctgaagacgttagacaga
gtcatcaacgagaccattacgtggaagaacgacacggtggccgagcaggagaagcgttct
cccacagagcggcccgtgctgctgtccaaagacatagagtccaagctgtctctgctggac
cgcgaggtccactacctgctgaacaaggccaagtttgccaagcccagggccaaggccaag
gccaacagcaccacctcagagagcagcagcaaggccaacagcactgtctcggagagcagc
agcaaggccaacagcagcaaaacagaagagaaagtcatacctcccaaggaggagactaaa
gacaaagaagccactaaggtggtgcagccaggagaggaaccgcccaccaaagagcccgct
ggacagaacaccgattcgtccagccaatcgcagcctaaagatgaaactgcaagtacagaa
tcaacagagaaagacaagtcagaaaagcatgtaggggatgagttataa
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