Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418158
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Entry
139418158 CDS
T10872
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A-like isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139418158
04121 Ubiquitin system [BR:
ocla04121
]
139418158
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
139418158
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139418158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_8
zf_UBZ
Endonuclease_7
MIX
zf-C2H2_REST
zf-C2H2_2
Zn_ribbon_TiaS
zf-MYST
Motif
Other DBs
NCBI-GeneID:
139418158
NCBI-ProteinID:
XP_071023500
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All DBs
Position
10:24836070..25000322
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AA seq
668 aa
AA seq
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MDLTKMGMIQLQNPNHPTALLKKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEVNMNEEGTEEDDERNCRQGGKNAKKHSMEGSYHSAVQQASALASMV
DQSPSVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTQGNSHHQLMTEIKTEMM
QVDEGGGHGSPRTMESSASSNGKRSGELDKNRDGPGTPTRSSVITSARELHYVREDGMGD
SQADGGQMGLEAMAGMTGMTEKHLASLYSLPTNHKNETMLSMPASMASSLHLSPALAMTM
DFSAYGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLH
SGMKTYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTGS
DMAIFCLLCGKRFQAQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHP
YECEFCGSCFRDENTLKGHKRIHTGEKPYECNGCGKRFSLKHQLETHYRVHTGEKPFECK
LCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHRPEDIPPDWRIEK
TYLYLCYV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacttgactaaaatgggtatgatccagctccagaaccctaaccaccccacggccctg
ctgaagaaggctaaccaaatgcgtctggccggaaccctctgcgatgtggtcatcatggtg
gacagccaggagttccatgctcatcggaccgtgctggcctgtaccagcaagatgtttgag
atcctgtttcaccgcaacagccagcattacaccctggactttctttcaccaaagaccttc
cagcagatactggagtatgcctacactgccacactccaggccaaagtggaagacctggat
gacctactgtacgcagcagagatcctagaaattgagtacctggaggagcaatgcctcaag
atcctggagacaatccagtcctcagacgacaatgacacggaggtcaacatgaacgaggaa
ggcacggaggaagacgatgagcgcaattgcaggcaaggagggaagaacgccaagaagcat
tccatggaggggagctaccattcagccgtccaacaagcctcggccctggccagtatggtg
gaccagagcccctctgtctccacatccttcgggctttccaccatgagcccaaccaaagct
gccgtggacagcctgatgagcataggccagtccctcctgcagcagggctttgggggcgag
cacctgactcaaggaaactcccaccaccaattgatgaccgagatcaagactgagatgatg
caagtggatgaaggcggaggacatgggagccccagaaccatggagtccagcgcctccagc
aatggcaaaaggagcggcgagttggacaagaaccgcgatggccccgggactccaaccagg
agcagtgtgatcacgagcgcccgcgagctgcactacgtccgggaggatggcatgggcgac
tcccaagcagatggcggccaaatgggtctggaagccatggcgggtatgaccggcatgacc
gagaaacacctggcctccttgtactcgctgcctaccaatcataaaaatgagaccatgcta
tccatgccagcctccatggcctcttctcttcatctgtcccctgccctggccatgaccatg
gacttcagtgcctacgggggacttctgccccagagcttcatccagagggagttcttcaac
aagttgggggagctggcagccggtatgaagccagacggtaggaaccagcatgaacgctgc
aacgtgtgtggcgcagagctaccagacaacgaagctgtggagcaacataggaagctgcac
agcggaatgaagacctatggatgtgagctgtgtgggaaacgctttctggacagcctacgc
cttaggatgcacttgctgtctcactcagctggtgagaaggccattgtctgtgaccagtgt
ggggcccagttccagaaggaggatgctctggaggctcacagacagatccacacaggctcg
gacatggccatcttctgcctgctgtgtgggaagcgcttccaggcgcagccggcactgcag
cagcacatggaggtccacgccggtgtgcgcagctacatctgcagcgagtgcaaccgcacc
ttccccagccatacggcactcaaacgtcaccttcgctcgcacacagcaggtgaccatcca
tatgagtgcgagttctgtgggagctgcttccgtgacgagaacactctgaagggccacaag
cgcatccacaccggggaaaagccctatgaatgtaacggctgtgggaagaggttcagcctc
aagcaccagctggagacccactaccgcgtgcacacaggtgagaagccgtttgagtgcaag
ctgtgccaccagcgatccagggactactcggccatgataaaacacctgcgcacccacaac
ggtgcctcgccgtaccaatgcaccatctgcctggagtactgccccagcctctcagccatg
cagaagcacatgaagggccacaggcccgaagacatccccccggactggaggatagagaag
acctacttgtacctctgctacgtctga
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