Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418201
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Entry
139418201 CDS
T10872
Name
(RefSeq) AP-2 complex subunit beta isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139418201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418201
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
139418201
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
NELF-A_N
Arm_2
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
139418201
NCBI-ProteinID:
XP_071023571
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Position
10:26539857..26624851
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AA seq
952 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKELDYYTTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAVPIEQAQSVIPSQGDLLGDLLNLDLGPPINVPQVSSMQMGAVDLLGGG
LDSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAALSSGLNDLFELSTGMAISTG
GYVTPKSVWLPAVKAKGLEISGTFSRRQGQMYMDMTFTNKALQHMTDFAIQFNKNSFGVI
PTTPLPIHTPLMPSQSIEVSLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSGLIPLNIF
FVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNDNIYTIAKRNVEGQD
MLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVTQYVYQVYYSVLKN
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcaaaatattttacaacaaataaaaaaggggagatctttgagctgaaggca
gagctgaacaatgagaagaaagagaagaggaaggaggcagtgaagaaggtcattgcggct
atgactgtgggcaaggatgtcagctccctcttcccagatgtggtgaactgcatgcagact
gacaacctggagctgaaaaagctggtctacctgtacctgatgaactacgccaagagccag
cccgacatggccatcatggctgtcaacagctttgtcaaggactgtgaggaccctaacccc
ctgatccgtgccctggctgtgcgcaccatgggctgcatccgcgtggacaagattacagag
tacctgtgtgagccactgagaaagtgtctgaaggacgaggacccatacgtgagaaagaca
gcagcagtgtgcgtggcaaagctccacgacatcaacgcccagatggtggaggaccagggt
tttctggactccctcagggatctcattgccgactccaaccccatggtggtggccaacgcg
gtggcagctctgtctgagattagtgagtcccaccctaacagcaacctgctggacctcaac
ccacagaacatcaacaagctgctgacagccctcaacgaatgcacagagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaagacgagcgcgaggcccagagcatc
tgcgagcgggtcacgccccgtctctcccacgccaactcggcggtagtgctgtcggctgtc
aaggtgctgatgaagttcctggaactgctacccaaggagttggactactacaccaccctg
ctgaagaagctgtccccaccgctggtcacccttctctctggggagccagaggtccagtat
gtggccctcaggaatatcaacctcatcgtccagaaaaggcctgagatccttaagcaggag
atcaaggtgttctttgtcaagtacaacgaccccatctacgtcaaactggagaaactggac
atcatgattcgcctggcctcccaggccaacatagctcaggtgttggctgagctgaaggaa
tatgccaccgaggtagacgttgactttgtgcgtaaggcagtgagggccatcgggcgctgt
gccatcaaagtggagcaatctgctgagcgctgtgttagcaccctgctagacctcatccag
accaaggtcaactatgtggtgcaggaggccatcgtggtcatcagggacatcttccgcaaa
taccccaacaagtatgaaagcatcatcgccacgctgtgtgagaacctggattctctggac
gagccggatgcgcgtgccgccatgatctggatcgtgggcgagtacgctgagaggatcgac
aacgccgacgagctgctggagagcttcctggagggcttccatgacgagagcacgcaggtc
cagctcactcttctcacagccatcgtaaagcttttcctcaagaagccctctgagactcag
gagctggtgcagcaggtcctcagtctggccacacaggactccgacaaccctgatctgcgt
gacaggggttacatctactggcgcctgctgtccaccgatccggtaacggccaaggaggtg
gtcttgtccgaaaagcccctgatctcggaggagacagacctgattgagcccaccctgctg
gacgagctcatttgccacattggctccctagcctccgtctaccacaagccccccaacgcc
ttcgtggagggcagccatggcatccatcgcaagcacctgcccatccagcacggcagcatt
gacacaggcgagagccctgtgagcgcagggccagcggtccctattgaacaggcccagtca
gtcatcccttcccagggagacctgctgggagacctgctcaacctggacctgggtcccccc
atcaatgtgccccaggtctcctccatgcagatgggcgctgtcgacttgctgggcggaggc
ctcgacagcctgctcggtggagacctgggaggaggtgttgggggaagtccagcagtggga
cagaattttattccctcatcagttcccaacacgttcgccccatcgccgactcctgcagcg
ctcagcagcggcctcaacgacctgtttgagctctccacaggcatggccatctccacagga
ggctatgttacccccaaatctgtatggctgcctgcagtgaaagctaaaggactggagatc
tcaggcacattctcccgccgacagggccaaatgtacatggacatgacctttaccaacaag
gccttgcagcacatgaccgacttcgctatccagttcaacaagaacagtttcggagtgatc
cccaccacccctctgcccatccacactccactgatgcccagccagagtattgaagtttcc
ctgcctctcaacaccattgggccagtcatgaagatggacccactgaacaacctacaggtg
gctgtgaagaacaacattgacgttttctacttcagcgggcttatcccactcaacatcttc
ttcgtggaggatggcaaaatggagcgacaggtgttcttggccacctggaaagacatcccc
aatgagaacgagcttcagtaccagattaaggagtgccacttaaatgcagacacggtgtcg
gggaagctgcagaacgacaacatctacaccatcgccaagaggaacgtggagggccaggat
atgctctaccagtccctcaagctcaccaacggcatctggatcctggctgagctccgcatc
caacccggcaaccccaactacacactgtccttgaagtgccgggctcctgaggttacccag
tatgtctaccaggtgtactattcagtcctgaagaactga
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