Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418244
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Entry
139418244 CDS
T10872
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03320
PPAR signaling pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139418244
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139418244
04137 Mitophagy - animal
139418244
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139418244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139418244
Ubiquitin system [BR:
ocla04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
139418244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
139418244
NCBI-ProteinID:
XP_071023645
LinkDB
All DBs
Position
10:complement(29419735..29421922)
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AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgctggcaagcagctggaagatggccgtaccctctccgactacaac
atccagaaagagtccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgctggcaagcagctggaagatggccgtaccctctccgactacaacatccagaaagag
tccaccctccaccttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgctggcaag
cagctggaagatggccgtaccctctccgactacaacatccagaaagagtccaccctccac
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgctggcaagcagctggaagat
ggccgtaccctctccgactacaacatccagaaagagtccaccctccaccttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaagacaaggagggcatc
cccccagaccagcagcgtctgatcttcgctggcaagcagctggaagatggccgtaccctc
tccgactacaacatccagaaagagtccacactccaccttgtgctgcgtctcaggggagga
cagtaa
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integrated database retrieval system
