Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418256
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Entry
139418256 CDS
T10872
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
ocla04144
Endocytosis
ocla05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139418256
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139418256
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139418256
NCBI-ProteinID:
XP_071023673
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Position
10:30354179..30401100
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AA seq
1686 aa
AA seq
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MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQRWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPATGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRKFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTNSLTELFESFKSFEGLFYFLGSIVN
FSQDLEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEEAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALTNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLGWFLTE
DKKECFAACLFTCYDLLRPDVVLETAWKHNIMDFSMPYFIQVMREYLFKVDAIKEKVDKL
ETSESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGYPQAPQAQP
GFGYGM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccagaacttgggcatt
aacccagccaacattgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgggagaaggtgggcgagcaggcacaggtggtgatcatcgacatggctgaccccaacact
cccatccgcagaccaatctctgctgacagcgccatcatgaaccctgcctccaaagtcatt
gcacttaaagccgccaaaacccttcagatctttaacattgagatgaagagcaagatgaag
gcccacaccatgactgatgacgtcaccttctggaagtggatctccctgaacacagtggca
cttgtgactgacaatgccgtctaccattggagcatggagggggactcccagccaatcaaa
gtctttgaccggcactccagcctggcgggctgtcaaatcatcaactaccgcactgacgcc
aagcagagatggctgctgctcattggcatctccgcacagcaaaaccgtgtggtgggtgcc
atgcagctgtactctgtggacaggaaggtgtcacagcccatcgagggccatgccgcaggc
ttcgcacagttcaagatggagggcaacacagaggagtccacactgttctgctttgctgtg
agaggacaggctgggggaaagttgcacatcattgaggtgggcaccccagccacagggaac
cagccttttccaaagaaagcagtggatgtgttcttccctccagaggctcagaatgacttc
ccagtggccatgcagataagctccaagcaggatgtggtgttcctcatcaccaaatatggc
tacatccacctgtatgacctggagactggcacctgcatctacatgaacaggatcagcgga
gagaccatctttgttacggcccctcacgaagccactgccggcatcattggggtcaacagg
aaaggacaggttctgtcagtgtgtgtggaggaggagaacatcatcccctacatcaccaat
gtgctgcagaacccagacctggccctgcgcatggccgtccgtaacaacctggccggggcc
gaggagctgttcgcgcgcaagttcaacaacctgtttgccggcggaaactactctgaagct
gccaaggtggccgccaacgcaccaaagggcatcctgcgtactccagacaccatccgtaag
ttccagagtgtgccagcccagccgggccagacctctcccctgctgcagtactttggcatc
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtccta
cagcagggacgcaagcagctgctggagaagtggctcaaagaggacaagctggagtgttct
gaggagctgggggacctggtgaagtcagtggaccccaccctggctctctccgtctacctg
agggccaatgtacccaacaaggtcatccagtgcttcgctgagaccggacagttccccaag
atagtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctgaggaac
gtgatgaggatcagtccagaacagggcctgcagttctcccagatgctggtccaggacgag
gagcctctggctgacatcacacagatcgtggatgtctttatggagtataacctgatccag
cagtgtacctccttcctattggacgccctgaaaaacaacaggccttctgaggggccgctg
cagacacgccttctggagatgaacctcatgcacgccccacaggttgctgatgccatcctg
ggcaaccagatgttcaccaactacgaccgtgcccacatagcccagctgtgtgagaaggct
ggtctgctgcagagagctttagagcactacactgacttgtacgacatcaaacgggccgtg
gtgcacacacaccttctcaacccagagtggctggtgaacttctttggctccctctcagtg
gaggactctctggagtgcctgagggccatgttgtctgccaacatccgtcagaacctgcag
atctgtgtccaggtggcttccaagtaccacgagcagctctccaccaactctctaacggag
ctcttcgagtccttcaagagtttcgagggtctgttctacttcctgggttccattgttaac
ttcagccaggacctagaggtccacttcaagtacatccaggcagcctgcaagacgggacag
atcaaagaggtggagaggatctgcagagagagcaactgctacgaccccgaacgagtcaag
aacttcctcaaggaggccaagctgaccgaccagctcccactcatcattgtgtgtgaccgc
ttcgactttgtccatgacctggtcctctacctgtaccgtaacaacctgcagaaatacatt
gagatctatgtgcagaaagtgaaccccagccgtctaccagtggtgattggagggcttctg
gacgtggactgttctgaggacgtcattaagagtctgatcctggtggtcagaggacagttc
tccactgatgaactggtggctgaggtggagaagaggaaccgactgaagcttctcctcccc
tggctggaggcccgtatccatgagggctgtgaggagcccgctacccacaatgccctggcc
aagatctacatcgacagcaacaacaaccccgagcgcttcctgcgtgagaacccctactac
gacagccgcgtggtgggcaagtactgcgagaagagggacccccacctggcctgcgttgcc
tacgagagaggacagtgtgaccaggaactcatcaacgtgtgcaatgagaactccctgttc
aagagtctgtctcgctacctggtccgtcgcagagacccggacctgtgggccagcgtgctg
ctggagagcaaccccttcagaagaccactcattgaccaggtggtgcagacagccctgtct
gagacccaggacccagaggaggtgtcagtcacagtaaaggccttcatgactgcagacttg
cccaacgaactcattgagctgttggagaagatcgtactggataactctgtcttcagtgaa
cacagaaacctgcagaacctgctgatcttgacggccatcaaggcagaccggacccgtgtg
atggagtacatcaaccgcctggacaactatgacgccccagacattgccaacattgccatc
agcaacgagctcttcgaggaggcctttgctatcttcaggaagtttgacgtcaacacctct
gccgtgcaggttctcattgagcacattgggaatctggatcgagcctatgagtttgccgag
cgctgcaacgagccagctgtgtggagccagctggccaaggctcagctgcagaagggcctg
gtcaaggaggctatcgactcctacatcaaggctgacgacccctctgcctacatggaggtg
gtacaggccgccgaccagagtggtaactgggaggacctggtgaagttccttcagatggcc
cgtaagaaggcccgggagtcctacgtggagacagagctcatcttcgccctggccaagacc
aaccgcctggctgagctggaggagttcatcaatggacccaacaacgcccacatccaacag
gtcggcgaccgctgttacgacgagaaaatgtacgatgcggccaagttactgtacaacaac
gtgtccaactttggccgtctggcgtccaccctggtgcacctcggggagtaccaggcggct
gtggacggggcccgcaaggccaacagcactaggacctggaaggaggtgtgctttgcctgc
gtggatggaaaggagttccggctggcacagatgtgtggcctccacatcgtggtgcatgct
gacgaactggaggagcttatcaactactaccaggaccgtgcttactttgaggagctgatc
accatgctggaggcagccctggggctggaacgggcgcacatgggtatgttcaccgagctg
gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tccagagtcaacattccaaaggttctgcgggcggcggaggaggcccacctgtgggcggag
ctggtgttcctgtacgataagtacgaggagtttgacaatgccatcatcaccatgatgaac
caccccaccgacgcctggaaggagggccagttcaaagacatcatcaccaaggtggccaac
gtggagctgtattacaaagcaactcagttctatttggagttcaagccgttgttactgaat
gacttgctcatagtgctgtcccccagactggaccactcccgtgctgtcaacttcttcagc
aaggtgaaacagctgcccctggtcaagccctacctgcgctctgtacagaaccacaacaac
aagtctgtcaatgaagcacttaccaacctcttcatcacagaggaggactatcaggctctg
aggacctctatagatgcctatgacaactttgacaacatctcgcttgcccagcgcttggag
aaacacgagctgattgagttcaggaggatcgctgcctacctcttcaagggaaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacaaactctacaaggatgccatgcagtac
gcgtcagagtccaaggatacagagttggctgaggagctactgggctggttcctgaccgag
gacaaaaaggagtgctttgccgcctgcctcttcacctgttatgacctgctgaggccagac
gtggtgctggagacggcctggaagcacaacatcatggacttctccatgccctacttcatc
caggtcatgagagagtatctcttcaaggttgatgcaattaaggaaaaggtggacaagctg
gagacctcggagtccctaaggaaagaagaggagcaggcgacagagacacaacccatcgtc
tatggcacaccccagcttatgctgactgctggcccaagcgtgcccgtgcccccccagcag
gcctatggctacggttaccaggctcctgcaggctacccccaggcacctcaggcccaacca
ggctttggctacggcatgtaa
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