Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418257
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Entry
139418257 CDS
T10872
Name
(RefSeq) vacuole membrane protein 1-like isoform X1
KO
K21248
vacuole membrane protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139418257
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GFIT
Motif
Pfam:
VTT_dom
DUF2949
Motif
Other DBs
NCBI-GeneID:
139418257
NCBI-ProteinID:
XP_071023675
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Position
10:30403272..30510486
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AA seq
448 aa
AA seq
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MTRPANTTQCPPVQPLLNEMAKNGADCELPQRRLSAREKHNRQSADSLSLSERKQRDREE
RVSLVLWKKPLVTLHYFLRELLTTLKDWMWRLWRQRHSVLPLLVLVTLFSIAYSVKGTHQ
KYVQHMEKRFLWCAYWVGLGILSSVGLGTGLHTFLLYLGPHIASVTLAAYECGSVDFPEP
PYPEQIICPQEEVLLGGTEAVAQAGVEGLAGVAAAVQGSISLWTIVSKVRLEACMWGAGT
AIGELPPYFMARAARLSGEEPDDEDYEEFGELLEQAETPQDFATRAKLAVQKMVQRVGFF
GILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIKMHIQKLFVIITFSSHIVE
QMVSLIGAVPVLGSSLQKPFREYLQAQRAKMHLHAGEGTSADENWLSWVFEKVIVVMVCF
FVCSIVNSMAQSYAKRQQQQMYSEGKTK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactagacctgccaacactacacagtgtcccccagtccaaccactactcaatgagatg
gcaaaaaatggggcagactgcgagctacctcagaggcgcctatcagccagagaaaagcac
aacaggcagtctgcagactccttgtcgctgagtgagaggaagcagagggaccgcgaggag
cgtgtgtctctggtgttatggaagaaaccgctcgtcacgctacactacttcctgcgggag
ctgctcacaaccctgaaggactggatgtggaggttatggcggcagagacattcagtcttg
cctctgctggtgctggtcaccctcttctccatcgcctactctgttaaaggaacacatcag
aagtatgtgcaacacatggagaagaggttcctgtggtgtgcctactgggtaggcttgggt
atcctctcatctgtgggactggggactggcctgcacaccttcctcctctacctgggtcca
cacatagcatcagtgaccctggcagcatatgaatgtggttcggtggatttcccggaaccc
ccctaccccgagcagatcatctgcccccaggaagaggtgttgttgggggggacagaggcc
gtggcccaagcgggtgtggagggcttggcgggggtggcagcagctgtacagggaagcatc
tccctctggaccattgtctccaaggtccgcttagaggcctgcatgtggggagcaggcaca
gccatcggggagctgcccccctacttcatggcacgggcagcgaggctgtctggagaagag
cctgatgatgaagactatgaagagtttggagagttgctggagcaggcagagactccacag
gactttgccaccagagcaaaactagcagtgcagaaaatggttcagagagttggattcttt
ggaattctcgcctgtgcctctatcccaaatccattgtttgacctggcaggtataacatgt
ggccatttccttgttcccttttggaccttttttggagcaacactaattgggaaagccata
atcaaaatgcacattcagaaactgtttgtgatcataaccttcagcagccacatagtggag
cagatggtgtctctgatcggtgctgtcccagtgctgggctcctctctacagaagcccttt
agggagtacttgcaggcccagagagccaagatgcacctccacgcgggagaggggacctca
gccgatgaaaactggctgtcgtgggtctttgagaaggtgatcgtggtcatggtttgtttc
tttgtctgctccatcgtcaactccatggcccagagctatgccaagcgccagcagcagcag
atgtactctgaggggaaaaccaagtga
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