Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418357
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Entry
139418357 CDS
T10872
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061
Fatty acid biosynthesis
ocla00071
Fatty acid degradation
ocla01100
Metabolic pathways
ocla01212
Fatty acid metabolism
ocla03320
PPAR signaling pathway
ocla04146
Peroxisome
ocla04216
Ferroptosis
ocla04920
Adipocytokine signaling pathway
Module
ocla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
139418357
00071 Fatty acid degradation
139418357
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139418357
09143 Cell growth and death
04216 Ferroptosis
139418357
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139418357
03320 PPAR signaling pathway
139418357
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ocla01004
]
139418357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139418357
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
139418357
Lipid biosynthesis proteins [BR:
ocla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
139418357
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of breast milk
139418357
Exosomal proteins of breast cancer cells
139418357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
139418357
NCBI-ProteinID:
XP_071023849
LinkDB
All DBs
Position
10:complement(35414670..35433957)
Genome browser
AA seq
710 aa
AA seq
DB search
MMFKVDMHYIVFLPVYLLMWLYTLITFIPWYFLTNAGKKKAMAKREKAKSTTGKAEGPYR
CVENVDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAFGLNECGATHLITSAELLETKLKNVLPDMLNLKHVIYVDNKSISRTGYPE
GIQIYSMQAVQELGAKPDNLSVAVQRPQPTDLAVVMYTSGSTGRPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NMLLFKKVKALLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHSDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIDNI
CAYANSDQNYVISFVVPNQKQLTTLANNNGISVAWEEICNHPAMEKEVLKAIKEVAASIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaaagttgacatgcattacatagtcttcttgcctgtgtacctattgatgtgg
ctgtacactctcatcacgtttatcccatggtatttcctcactaatgctgggaagaagaaa
gccatggccaagagagagaaagccaagtctaccacaggcaaagcagagggcccctatcgt
tgtgtggagaacgttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggtaccagggag
ctcctaaatgaggagaacgagacgcaacccagcggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgatgaggtggaccagatcatcagccatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttttgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcacgctg
tatgccaccctgggggaggaagcggtggcctttgggcttaatgagtgtggggccacacac
ctgatcaccagcgcagagctactggagactaaactcaagaatgttttgccagatatgctc
aacctgaagcacgttatatatgtggacaacaagagcatcagccggacgggctaccctgag
ggcattcagatctacagcatgcaggcagtacaggagttgggagccaaacctgacaacttg
agtgtagctgtgcagcgcccccagcccacagatctggctgtggtcatgtacaccagcggc
tccacaggacgacccaaaggagtcatgatcatccacagcaacctgatcgctggcatgacg
ggccagtgtgagaggatcccaggactggggccaaaggatacctacattggctacctgcct
ctagctcatgtgctggaaatgactgctgaaatctcatgtatgacgtatggctgcaggatt
ggctactcttctccacaaacactctctgaccagtcaacaaaaatcaagaagggcagtaaa
ggagactgctctgtgttgaggcctactctgatggcagctgtaccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctacgatgccccactctgc
aacatgctgctatttaagaaggtgaaggctctgctgggagggaacatcaggatgatgttg
tcaggaggagcgcccctgtcctccgccacccagcgcttcatgaacatctgcttctgttgc
cccgtgggacagggctatggcctcacagagacctgcggagcaggtaccatcacagaggtt
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtgaaactacga
gactgggttgagggtggatacaccagccaggaccaaccccacccccgtggagagatcatg
attggtgggcccaacgtaaccatgggttactataagagcgagcacctgaacaatgacttc
tgggtagatgagcagggccagaggtggttttgtaccggggatgtgggagagatccactct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tatgtgtccttggggaaagtggagtctgctctgaagaactgcccccttattgacaacatc
tgtgcatatgcaaacagtgaccagaactacgtgataagctttgtggtaccgaaccagaag
cagctgacaactctggccaataacaacggcataagtgttgcctgggaggagatctgtaac
cacccagccatggagaaggaggtcctgaaggccatcaaagaggtggctgcctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctaagcccagagccctggactcctgag
actggcctggtgacagatgcattcaaattgaagaggaaggagctgaagaatcactttcag
actgatatagagagaatgtacggagggaagtag
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