Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418359
Help
Entry
139418359 CDS
T10872
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139418359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418359
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139418359
Endosome - Golgi transport
Arf GTPase associated proteins
139418359
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139418359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_3
PH_6
PH_8
RA
PH_13
RNR_Alpha
Ras_bdg_2
NICE-1
Motif
Other DBs
NCBI-GeneID:
139418359
NCBI-ProteinID:
XP_071023852
LinkDB
All DBs
Position
10:35455160..35466731
Genome browser
AA seq
1125 aa
AA seq
DB search
MADNEDALRAMQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSQSFNPDFHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILSVTKVLDVGGQK
FEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRCNSMEKSLMNFSDTCGQRASRVSLIS
KQGYLEMSGLRSKLYVVICADSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEALQDCVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWAS
VNLCVVLCKCCAGVHMGLGQSVSKVRSLKMDEKAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDREERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAALPISHT
GYLFKTASSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIGKALVPPVAEDLVGWSFERVGR
LRYTAGQSFHCPCMGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSVEQEAAAVMLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSERRERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAI
VFGPTLFQADGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEEHAEEGT
PSPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQ
EMERPLHHQERALAIYFSLGKGCHLVVKRNCYMEAMLIYIAAMVDVSRNSMIKFSDEKGQ
RGKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVC
EQAERDKQQWYLCCESKNELIKWLATFMNLQHNSDLCPAASCPDS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgaggatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggagaacatctgttgatgaagac
agtatctatcttggctgcacactgtcacaatccttcaaccctgattttcaccactcacct
gttatcaagatgggctggctgcacaagaccccacctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacagtaccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatactgtctgtcactaaagtgcttgatgttggaggacagaag
tttgaggtggtgacaaggaacaggactttcttgttccgtgctgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcgttgtaacagcatggagaag
tcccttatgaacttcagtgatacgtgtggacagcgtgctagtagagtctcgctcattagt
aagcagggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctataggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtactgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggagcagcagagggagcagtgggttgag
gccctgcaggactgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggccaaccagcgctgtgcagattgtggcgccccccacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacatgggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaaggcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagagaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactgtttggccaacaggaagccctcaacaaa
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctgcccagccctgtgtccgtggcc
cagcactatggacagacacttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaagggctggagatcacacaatcttagaggctgctctccccatctcacacact
ggttatctgttcaagactgcctcctcaacacgagcagttacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctctttgaatcaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacacggtgagggagtggatcaaggtcattggcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcgctacactgcgggccagagcttccattgtccttgcatgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataacatcgacctgcga
aaactacaggagctctccgtggagcaagaagctgctgctgtgatgctggtggacagaggc
aggaggctgcgtttggagggggacaggaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcatcgtggaccgctgcattagctacatcacacagcatggtttgaagtcagag
ggcatctatcggaggtgtggtgtgaactctaagatcgccgccctgctgctctctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagtgggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactactgtcagtgagagaagagagagagtgtcccagtacaag
gccctcctccacagcctccccccagtcaacagagccaccctgggggctgtcatcaaccac
ctctactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccatt
gtgtttggtcccacgctcttccaggcggacggcactgataacagcgcaggacaggtggta
gaggagctcatccagaactaccaagatattttcaatgtgaatgctgagcagcttcagagg
cagctggacatgatctctcatgtcatcaaagcacaggaagaacacgccgaggaggggacc
ccctcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctg
ctggttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgc
gggaacatccctccacagcagggggactattggagctgcttcctggtcaacgacaaccag
gagatggagcgtccattgcaccaccaggaacgagcgctggccatctatttctctctgggt
aaaggctgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctacata
gcggccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcaa
agggggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctc
tacaaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtc
tactatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgt
gagcaggcagaacgagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattg
atcaagtggctggccacttttatgaacctccagcacaatagtgacctgtgtcctgcagct
tcctgtccagattcctga
DBGET
integrated database retrieval system
