Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418397
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Entry
139418397 CDS
T10872
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
139418397
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139418397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139418397
NCBI-ProteinID:
XP_071023900
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Position
10:complement(36525640..36574117)
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AA seq
1968 aa
AA seq
DB search
MSAEMLSIPLGTSKLNVLVTKLHGFLAHSPEEDDTLVTESPEGIMTKDCVEPHSTDRTSL
ETSTDALKQSRCGSRRKPSVVIKHSGLDESGASNESDDDCLIVNSNGYPDVTRLPKGTAL
VRPEPVENVRDDFRGTEFHCGKSGHLRRVFPRRRGGGEHLAIVSCTACGQQVNHFQRDSF
NQHPVLKVLICKSCFKYYSSDDISKDCDGLDEQCRWCAEGGNLICCDFCPNAFCKKCILR
NLGRKELSGILDEESKWYCYVCSPAPLLDLVVACDNVLDNLGSLWQDHRKRGRGDGKSGH
CDSHPRHSQNIPTGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNTTFVKFI
KGGMDFKRQYLKTFQSVLKGLKKSHTALEEALWEEFKEIGLPKDGGNPTFGTDAPQQAQE
GCVEMDIVDKNCLHYLKKIASEHLEENDSDSKGFTDDERPSSSSEMKGVLGTEIIPRRGR
GRPRKNSKPGEDPSNMTKQLVVQLTPVPVEKQPPSGPPELELELEAEEKKELEEEIKEKV
DERKRDCESIEPATEGEYESAEEGNKSLVLELEDEPENRRSPRVKTTPLRRPGEGKTKST
PSGADSEGDSDPDTSPNVEVPQGADEGGLGRGIEDSDSDEVPAVLQRAAMARSSDEAGSD
DGDHRSVTKKCLFGLKKNTALSPERVVRKRKVQDRSSDSDSSSDNPDLQKEIKTMSRPRG
RPRKVKREDDPTPSKNSPQQPGRPRKVKKENESAFSKEGNTQVTKPKSTPRSQQKTKQSP
SSSSQEEGDQDSESSDDSGDQKIKPITEEVALLGSAAFHQSSGDEEQTRSRPSWDAEDDD
DPENRIAKKMLLAQIKANYSSGEDFSSDEESSQEDESDREEKAQEEGKDQSSDENGETSS
LTSDSESSKTRHRHCLLRHKLSLDDGNPSDQKTAEENGNEQRVKKSRRTEGETLESQSSD
DSQSEQEESGMSEELSQSENEGNEQKPKSSSTSRVERESVRSYLQKKQQPSYIVLSDSSV
DKSEDDEKDGDNKGTPKGRKKIRRIIIDEHLRSETQRALKEEEDRCRRLADREQREDFRE
VIVIDDEVSQVACPITTKLVLDQDEGTREPLIQVHRNLVTRLKPHQVDGVQFIWDCCCES
VKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSRCLNFRTALVVCPLNTILNWVNEF
DKWQVNMGADKVKVTELATLKRPQERYIALQKWQKDGGVMIMGYEMYRNLTLGLKVTHRQ
FKKTFNSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRVVLTGTPLQNNLNEYH
CMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRVMKNRAHVLHAMLAGCVQRRD
YSALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGAGSVVEGARGKTGTSLFKDFQIL
SRIWTHPWCLQLNFISKENKGHFDGKHQGKAESKEKENKGKLRNADDKSNDVEVIMVWNS
SSKGVNVEGDQRAGPLVPVVDAVRASTSFRPDSPAADWYKSMLSDSDATILGHSGKMVLL
FEILRMAEELDDKLLVFSQSLISLDMIEDFLDLANKAKDNGQSSLYKGDGSWIRNIDYYR
IDGSTSATSRKKWAEEFNDATNERGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDI
QSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIQRHFTLFELT
ELYMFEPDLLDDPNSEKKSKRITPLLPKDIVLAELLQICKEQIVRYHEHESLLDHKEEEE
LSEADRKAAWAEYEAEGAFFLNKAALSSTNVPSPSTSRMANSLSSLYKKTNEQLKNMINA
SRDKVSEAIKSLHSLKNLSMDDYVLRLWHDNPSLDEKQVKVLAQTWKTSNDKERERRRAL
YHDLLSKQQSLTMCIQTILTSRKTEVTETATVTNQTPALTDSVKKPML
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagagatgctcagcattcctcttggcacgagcaagctcaatgtgttggtgacc
aaactgcatgggttcttggctcattctccagaggaagatgacacactggtgactgaaagt
cctgagggtataatgaccaaggactgtgtggagccacactcaacagaccgaacctccctt
gagacctcaacagacgccttgaagcagtccagatgtggttccaggagaaaaccttccgtt
gtgattaaacacagtggactggatgaatctggtgcttcaaatgaaagtgatgatgactgc
ttgatcgtcaattcaaacggttatcctgatgtaacaagattgcctaaaggtactgcactg
gtgaggcctgagccggtggaaaatgtcagagatgacttccgaggtacagaattccattgt
ggaaaatctggtcatctgaggagagtttttcccaggagacgtggaggaggtgaacacttg
gcgattgttagctgtacagcctgtggccagcaagttaaccacttccagagggactccttc
aatcagcatccggtactcaaagtacttatttgcaagtcttgtttcaagtattactcaagt
gatgacatcagcaaggattgtgatggcctggatgaacagtgcagatggtgtgcagagggg
ggaaacctgatctgctgtgacttttgccccaacgccttctgtaagaaatgcattttgcgt
aatctggggcgaaaggagctgtctggcatcctagatgaggagagtaagtggtactgctac
gtatgcagcccagcgcctcttctagacctggtcgtcgcctgtgacaacgttcttgacaac
ctggggagtttgtggcaagaccaccgcaagaggggcagaggtgatggcaaatctggacat
tgtgactcccatcccaggcattctcaaaacattcccacgggtcattggaaccatagtggc
atggatggtcatgtggtgttcaactacaacacccttcaaattccagaggagatggccaaa
aaggcaaaaaaccttgtggactctacaaacactgtaaacacaacttttgtgaaattcatt
aaaggtggaatggattttaagcgacaatacttgaagactttccagtcagtactaaagggt
ctgaagaagtcccacacagctctggaggaagccctttgggaggagttcaaagagattggt
ctgccaaaagatgggggaaaccccacttttggtactgatgcacctcaacaagcacaagag
ggttgtgtggaaatggacattgttgataaaaattgcctgcattacttaaagaaaattgca
tctgaacatttggaagagaatgattcagactctaaaggctttacggatgatgaaaggcct
tcgtcctcaagtgaaatgaaaggtgtccttggcacagagataataccccgtcgaggtaga
ggcaggccacggaaaaactccaaacccggagaagatccttccaacatgacaaaacaactg
gtggtgcaacttacacctgtccctgttgaaaaacagccaccctctggccccccagagttg
gagttggagttggaggcggaggaaaaaaaggagttggaggaagaaataaaagaaaaagtg
gatgaacgtaagcgggactgtgaatctattgaacctgcaacagaaggggagtatgaatct
gctgaggagggaaacaaatctcttgtgctggaactggaagatgaaccagagaatagacgc
tcacctcgggtaaagaccacacccttacgcaggccaggtgagggcaagaccaagtctacc
ccctcaggcgctgacagtgagggtgactccgaccctgataccagccccaatgttgaagtg
cctcaaggagctgatgagggagggcttgggagaggaattgaagactcggactccgatgag
gtccctgcagtccttcagcgggcagccatggctcgcagttcagacgaagccgggagtgac
gatggagaccatcggagcgtgaccaagaaatgcctcttcggcctgaagaagaacactgcc
ctctctccagaaagagtggtccgcaaacgcaaggtgcaagaccgctcctctgactccgac
tcctccagtgacaatccagacctgcagaaggagatcaagactatgagcaggcccaggggg
aggcctcggaaggttaagagagaggatgaccctacccccagcaagaatagtccacaacaa
ccgggcagacctcggaaggtcaagaaagagaatgaatctgctttcagcaaggagggtaat
acccaggtaaccaagcctaaaagcacacctcggtcccagcagaaaacaaagcagtcgcca
tcctcttccagtcaagaagagggagaccaggattctgagtctagcgacgacagtggtgac
cagaagattaagcctatcactgaggaggtggccttactggggtcagcagctttccaccag
tcatctggcgatgaagagcagacccggtctaggccttcttgggatgcagaagatgatgac
gatccagaaaatagaatcgctaagaaaatgctcttggcccaaatcaaagccaactactca
tcgggggaggatttctcttcagacgaggagtcatcacaggaagatgaatctgacagggaa
gaaaaggcgcaggaagaggggaaagatcaaagctcagatgagaatggggagacctccagt
ttgacctctgactctgagtccagtaaaactcgtcacagacactgtctgctacgccacaag
ctcagccttgacgatggaaatccaagtgatcagaaaacagctgaagaaaatgggaacgag
cagagagtcaagaagtctagaagaaccgaaggtgagacattggagagccagagtagtgat
gatagccaatcagagcaggaagagtctggtatgagtgaagagctgagccaatctgagaac
gagggcaatgaacagaagcccaaaagctcatctacctctagagtcgagagggaatcagtc
cgtagttatctacagaagaagcagcagccctcatatattgtgctgtctgactccagcgtc
gataagagtgaagatgacgagaaggacggagacaacaaaggtacacctaagggccgcaag
aagatccgcagaatcatcatagatgagcacctccgctcagagacccagagagccctgaag
gaggaggaggatagatgcagacgcctggcagacagagagcagagggaggacttcagagag
gtgattgttattgacgatgaggtgtctcaagtggcctgtccaatcaccactaagctggtc
ttggatcaggatgaggggaccagggagccactcattcaggtgcacaggaacctggtgacc
aggctcaagcctcaccaggtggatggtgtgcagtttatctgggactgttgttgtgagtca
gtgaagaaggccaattcaacccctggatcaggttgcttactggcccactgcatgggccta
gggaagacactgcaggtggtgacattcctccacacaatgctgcagtcaaggtgcctgaac
ttcaggactgccttggtggtgtgtccactcaacactatccttaactgggtcaacgagttt
gacaagtggcaagttaacatgggagctgacaaagtcaaggtgacagagttggcaacactg
aagcgacctcaggagcgttatattgccctgcagaaatggcagaaggatggtggtgttatg
atcatgggctatgagatgtaccgcaacctcacactaggcctcaaagtcacccacagacaa
ttcaaaaagacctttaacagcacactggtcgatccaggtccagactttgtgatctgcgat
gaggggcacatccttaagaacgaggcgtccaacatctccaaagctatgagtgccattaag
accaaacggagagtggtgctgacaggcaccccactgcagaacaacctcaatgagtaccac
tgcatggtgaacttcatcaaggagaaccttctaggctcaatcaaggagttccggaatcgg
tttatcaaccccattcagaatggccagtgtgcagactccacccccagagatgtccgcgtc
atgaagaatcgcgcccatgtccttcatgcaatgttggcaggatgtgtacagaggagagac
tactcagccttgaccaagttcctgccccctaaacatgagtatgttatggcagtgagggtg
acccccctccagtacagactgtatcgctactacctggacaacttcactggagcaggatct
gtagttgaaggagccaggggcaagactggaaccagcctctttaaggacttccagatactc
agccgaatctggacgcatccctggtgtctgcagctcaactttatcagtaaagaaaataag
ggccattttgatggaaagcaccaggggaaagctgagagtaaagagaaggagaacaaggga
aaattgcgtaatgctgatgataaaagcaatgatgtggaagtgatcatggtgtggaacagc
tcatcaaagggtgtcaatgtggaaggagaccagcgagcagggccactggttccagtggta
gatgcggtgagagcgtccaccagtttcaggcctgacagtccggctgcagactggtacaag
tcaatgctgagtgattctgacgccaccatcctgggacactcagggaagatggtgctgctg
tttgagattctccgaatggcagaggaactggacgacaaactgttggtgtttagtcaatcc
ttgatctcattagacatgattgaagatttcttggacctcgctaacaaagccaaagacaac
ggacaatcatccctatacaaaggtgatggcagctggatcagaaacattgactattaccgt
attgatgggtccaccagtgccacatccaggaagaaatgggctgaagagttcaatgatgcc
accaatgagcgaggtcgtctgtttctcatctcaacaagagctgggtcccttgggatcaac
ctggtagcagctaacagggtcatcatttttgacgcttcgtggaacccctcctatgacatc
cagagcatcttcagggtgtaccgttttggccagctgaaggcagtgtttgtctaccgcttc
ttggcacagggcaccatggaggagaagatctatgaccggcaggtggccaagcaatctcta
tcgttccgggtggtggaccagcagcagatacagagacacttcactctgtttgaactgaca
gagctttacatgtttgagccagacctgctggatgatcccaactctgagaagaagagcaag
cggatcacacccctgctgcccaaggacatcgtcctggcagagctgctgcagatctgtaag
gagcagattgtccgataccatgaacacgagtccctgctggaccacaaagaggaggaggag
ctcagtgaggccgaccgcaaagctgcctgggctgagtacgaggcagagggtgcattcttc
ttgaataaggcagcactcagcagcaccaacgttcccagcccctccacctctcgtatggcc
aacagtctgtcatccctgtacaagaagactaatgagcagctgaagaacatgattaatgcc
agccgtgacaaggtcagcgaggccatcaagtccctgcattccttaaaaaacctctccatg
gatgactatgtgttgcgcttgtggcacgataacccaagtctagatgagaagcaggtgaaa
gtcctggcccagacctggaaaaccagcaatgacaaggagcgggagcgaaggcgagcctta
tatcatgaccttctctcaaaacaacaatcacttacaatgtgcatccagaccattttgacc
agtagaaaaactgaagtgacagagactgccacggtcaccaatcagacaccagccttgaca
gactccgttaagaaacccatgctgtga
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