Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418471
Help
Entry
139418471 CDS
T10872
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139418471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139418471
03012 Translation factors [BR:
ocla03012
]
139418471
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139418471
Translation factors [BR:
ocla03012
]
Eukaryotic type
Release factors
139418471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
139418471
NCBI-ProteinID:
XP_071024043
LinkDB
All DBs
Position
10:41311421..41316455
Genome browser
AA seq
446 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVTLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMVEKGTDEKTLYLTPEQE
KDKSHFTDKETGQEHELIESMPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcagacaggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggtacgagtatgatctccttgattatccct
ccaaaggatcagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aatattaaaagcagagtcaacaggctctctgtgctcggagccatcacctctgtacagcag
agactcaaactctacaataaagtgcctcccaacggcttggttgtatactgtggcaccatt
gtgacggacgagggcaaagagaaaaaagtcaatattgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagccttgctg
tcagatgacagcaagtttggttttattgtgattgatggaagtggcgccctcttcggaacc
ctgcagggaaacaccagggaagtgctgcacaagttcactgtggacctacccaagaagcac
ggcagaggagggcagtctgccttgcgttttgctcgtttgaggatggagaagagacacaac
tatgtccgaaaggtggcggagacggcagtcacgctttttgtttccaacgacaaggtcaac
gtagcaggcatggtcttggctggttcagctgacttcaagactgagctcagccagtccgat
atgtttgacccgaggctacaagcaaagatcctgaagctggttgacatatcatatggtggg
gagaatgggttcaaccaggccattgagctgtctgcagaagtgctttccaatgttaaattc
attcaggagaagaaacttataggacgatactttgatgagatcagccaggatacagggaaa
tactgctttggggtggaagacacactgaaagccctggaaatgggtgctgttgagattctg
attgtctacgagaacctggataccatgagatacatcctgagatgccacggagcagaggga
cttgctatggtggagaagggtacagatgagaaaacgttgtatttgacaccagagcaggag
aaagacaagtctcacttcacagacaaagagactgggcaggagcatgagctgatcgagagc
atgccgttacttgaatggttcgccaacagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtcaagggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
DBGET
integrated database retrieval system
