KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418473
Entry
139418473         CDS       T10872                                 
Name
(RefSeq) F-box and WD repeat domain-containing 11-B-like
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04114  Oocyte meiosis
ocla04120  Ubiquitin mediated proteolysis
ocla04218  Cellular senescence
ocla04310  Wnt signaling pathway
ocla04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139418473
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    139418473
   04340 Hedgehog signaling pathway
    139418473
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    139418473
   04218 Cellular senescence
    139418473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139418473
   03036 Chromosome and associated proteins [BR:ocla03036]
    139418473
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     139418473
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     139418473
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I DSE1_N WD40_MABP1-WDR62_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 CFAP251_N F-box-like Beta-prop_Aladin PAC11 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_VPS8 ASA1 Beta-prop_DCAF4 NBCH_WD40 TRM82_WD Beta-prop_IFT140_1st WD40_like Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513 DUF7899 DUF4508
Other DBs
NCBI-GeneID: 139418473
NCBI-ProteinID: XP_071024045
LinkDB
Position
10:41325850..41336941
AA seq 526 aa
MEPEMEDKTLELMNTTFMDSQTDDLSSKKIIVFKTITNGPMTGSRKRPSEGNYEKEKDVC
IQLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENIL
SFLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRT
TEVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISG
LRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL
IHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYI
VSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL
RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVF
RLQFDEFQIISSSHDDTILIWDFLNVSTNGQTEGRSPSRTYTYISR
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaacgttagagctgatgaacaccactttcatggactcc
cagacagatgacctctcatcaaagaagatcatagtgttcaagacgatcaccaatggtccg
atgacgggctcaaggaagcggccatcggaagggaactatgagaaggagaaggacgtgtgc
atccagctgtttgaccagtggtctgaggctgaccaggtggagtttgtggaacacctgatt
tcacgcatgtgccactaccaacacggccacatcaactcctacctcaaacccatgctccaa
agggacttcatcactgcactgccagctcagggtctggaccacatagcggagaacatcctg
tccttcctggacgcacgctcgctgtgctcggcagagctggtgtgtaaggagtggcagagg
gtcatctcagagggcatgctgtggaagaaactcatagagcgtatggtccgtacagacccc
ctctggaaaggcctgtcagagaggcaccagtgggaaaagtacctgttcaagaatcgaacc
acagaagtcccaccaaactcctactaccgctccctgtaccccaaaatcatccaggacata
gagacaattgaggccaactggaggtgtggtcgacacaatctgcagcggatccagtgtcgc
tcagagaacagtaagggggtttactgtctgcagtatgacgacgacaagatcatcagcggc
ctcagagacaactccatcaagatctgggacaagcagtctctggagtgtctgaagatcttg
acgggtcatacaggttcagtgttgtgtctgcagtatgatgagcgggtcatcgtcaccggg
tcctcagactccactgtcagggtgtgggatgtgaacactggggaggtgctgaacactctg
atccaccacaacgaggcggttctccacttgcggttctgtaacggtctgatggtgacgtgc
tcgaaggaccgttccatcgctgtgtgggacatggcctcacccacagacatcagtctgcgc
cgcgtgctggtcggccatagagcagcggtcaacgtggtggactttgacgacaagtacatc
gtgtcagcgtccggtgaccgtaccatcaaggtgtggagcaccagcacgtgtgagtttgta
cgtacgctgaatggccataagagaggcattgcctgtctgcagtacagagacagactagtg
gtcagcggctcgtcggacaacactatccggttgtgggatattgagtgcggggcatgtttg
cgggtattggaaggccatgaggagttggtccgttgcattcgcttcgacaacaaaaggatc
gttagcggagcctacgatggtaaaatcaaagtatgggacttacaagctgctctggaccct
cgtgcccctgccagcaccctctgtctgcgcacactggtggagcactctgggcgtgtattc
cggctacagtttgatgaattccagatcatcagcagttcccatgacgacactatcctcatc
tgggacttcctgaacgtgtcgaccaatggacagactgagggcaggtcgccctctcgcacg
tatacatacatctccagatag

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