KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418555
Entry
139418555         CDS       T10872                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139418555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139418555
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139418555
 Complex B
    139418555
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 139418555
NCBI-ProteinID: XP_071024217
LinkDB
Position
10:complement(44309281..44316943)
AA seq 894 aa
MADKNVKKGKPVGVKRTLTKREQEDLKKKEQEKAADVFEEFLASFDSNDKSGVKTFVRGG
IVNATKEEEAAEVKKSKLYRPNTKFTSVSQNVSPAHSSEVRRPIVKKKTEEKKKSNLELF
KEELKQIQEEREERHKKKKNEPGGGYGELDIPLTRRSIFDDDPATPNTTNLYIGCINPKM
NEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMTRKDAERALAALDGKTVLG
FEMKLGWGKAVRIPPQPLYTPIGVLKISTPPPPSGLPFNAQPRDRFRNDFTKPWGRSKEE
FDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSKEKNNPDFRFLFDNKS
QEQVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLNPYLHGDEEAGEEEQSPSQ
EEELKKGQLKTEHRERLETLLRGLTPRREDVGDAMLFCLERAEAAEEVVGCIAESLSLLQ
TPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQIFGDISDAYRNIQARLQAEQ
FKQKIMGCFRVWEDWAVYPEPYLIQLQNIFRGLVKAGDEVIERVEVASPDLDGAPLDGAP
LDGAPLDDLDGSPLAWDPASLDGVPVDDIDGVPLGAPMDDIDGMPLDDLAHSKVALSKWE
RVDDAEALPQANTESKWDSVGERYSGDNMNVSTNTKEGDGESEGDSSDDDSPSKYDSADF
KSSLSSFEMSESKRSRLRELEVKVMQFQDELETGKRPRKSGMNMQKQVEHYRNKLLQKEF
DKDDQEKKERSTPKSKDRSKKEERRDKTEESSKGREKEKSKRSQDRDRSRDRGRSRDTEE
RTQKYRGHSPSKTKSKSPKKSKRSRSPSPARKTWRRSSSRSPHRSHKKSKKSKH
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggcagacaaaaatgtcaagaaagggaaacctgtaggtgttaagagaacattgaccaag
agagaacaagaagatctgaagaaaaaggaacaagaaaaagcagctgacgtttttgaagag
tttttagcatcttttgacagtaacgacaaaagtggggtgaaaacgtttgttcgtgggggg
atcgtgaatgcaactaaagaagaggaagcagcagaggtcaaaaagagcaagctttaccga
ccgaacacgaagtttacttcagtgtcccagaatgtctcaccagcacactcttcggaagtc
agaaggccgattgttaaaaagaagacagaagagaagaagaagagcaaccttgaacttttc
aaagaggagctaaagcaaatacaggaggaacgtgaagaaaggcacaaaaaaaaaaagaat
gagcctggaggaggatatggagaattggacataccactaacacgacgatcaatatttgat
gatgacccagcaacaccgaacacaacgaacctgtacattggctgcattaacccaaagatg
aatgaagaaatgctttgcaaagagtttggcaagtatggtcccctggcaagcgtgaagatc
atgtggccccgtagtgacgaggaacgtaccagggtcacaaacagaggcttcgtggccttt
atgaccaggaaagatgcagagagggccttggctgctctagacggtaaaacagttttgggt
tttgaaatgaagctgggatgggggaaagctgttcgcatccctccccagcctctctataca
cccataggggtactgaaaatctccactcccccacccccctctggcctgcccttcaatgct
cagccccgagaccgcttccgtaatgactttaccaagccatggggcaggtctaaggaggag
tttgacaagactctgtccgaagccgtagtcaaagtggttatcccaacagaaaggaatctg
ttgggcctcatccacaggatgatagagtttgtggtgcgtgagggacccatgtttgaagcc
atcattatgagcaaagagaagaacaaccctgacttcaggttcctgtttgacaacaaaagc
caagagcaggtgtactaccgctggaaactctactccattctccagggcgagccccccagt
gagtggaggacggcagacttccggatgttccgtgggggctccatctggaggccgcccctc
ctgaacccctacctccatggagacgaggaggcgggagaggaggaacagtctccctctcag
gaggaggagctgaaaaagggccagctgaagacagagcacagagagagactggagacattg
ctgagagggctcacccctcgtagggaggatgttggtgatgccatgctgttctgtctggag
agagccgaggcagcggaggaggtggtggggtgcatcgcggagtccctgtctctccttcag
acaccactgcagaaaaagattgccagactgtacctggtatccgacatcttgtacaactcc
tgtgccaaagttgccaatgcatcttattatcgcaaatattttgaagcaaaattgccccag
atatttggtgacattagtgatgcgtatcgaaacatacaagcaagactacaagcggaacaa
ttcaagcaaaagataatgggctgtttcagggtctgggaagactgggccgtctacccagag
ccctacctgatccagctgcagaatatctttcggggtcttgtcaaggcaggagatgaagtg
atcgagagggtagaggtggcgtctccagacctggatggagccccattggacggggcaccg
ttagatggagctccgctggacgaccttgacggctcgcccctggcctgggaccctgcctcc
ctggatggggtgcctgttgacgacatcgacggagttcccctgggcgctcccatggatgac
atcgacggaatgcctttggatgatctggcccactccaaagtggctctgtctaaatgggag
agggtggacgatgctgaagctctcccacaagctaacactgaatccaaatgggacagtgtg
ggagagcgatattctggggacaacatgaatgtaagtactaacactaaggaaggagatggc
gaatcagagggtgacagcagcgatgatgacagcccatctaagtacgacagtgctgacttc
aagagctccctcagtagttttgagatgtctgagagcaagaggagccggctgagagagctg
gaggtgaaggtgatgcagttccaggatgagctggagactgggaagaggcccaggaagtcc
ggaatgaacatgcagaaacaggtggagcactacaggaacaagctgctacagaaggagttt
gataaggatgaccaggagaagaaagagcgatccacgccgaagtcaaaagacagatcaaag
aaagaggagaggagagacaagacagaggagagcagtaaaggacgggagaaggagaagagc
aaaaggagtcaagaccgggataggagcagggacaggggacgtagtagagacacagaggaa
cggacacagaaatacagaggacattctccctcaaaaacaaagtcaaagtctcccaagaag
tccaagcggtcccggtcgccctcgccagccaggaagacgtggagaaggtctagctcccgg
tcaccacaccgctcccacaaaaagtccaagaagagcaagcactga

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