Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418574
Help
Entry
139418574 CDS
T10872
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
139418574
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
139418574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139418574
NCBI-ProteinID:
XP_071024243
LinkDB
All DBs
Position
10:complement(45085192..45093012)
Genome browser
AA seq
873 aa
AA seq
DB search
MDFRGNMDFRGYPLSSSLAPNLRRRGERGATGLVLDRRKSTVWNYYIQLNEMYVECNICK
RQLSFHNSTTTMREHLVRKHNIRDNAPPVLDNTAVAGAPIPATSLQPMAQPGFPCNISTT
SATANTCMFQTDLHIVVKEEQQDADLSPEQGMAKRARITCAPPLDVGGGANAIPVTSHSG
ITTKESNGKRTGVLTYLILEMVYRDFQPLSVVEERGFRLLLSYLEPQYPVPSPSQLGSLL
WHHYDVLKRHLQQYLQSGLAPRCITLCTEYWQSVAGCAVGAGGRLFFTVSAHFVDKDWRL
ARCVLQTCPMPDIREKICERGFIQFGDTLKAVLSEFHLPQSSVFCVVHDTPRISEAKGTE
NMGVPKEKVNRTAGPHQSPQDLPEGWVALHCAGEALKLCIQDGLCMEPVRQALAEARRII
SHFQHDAPAAAALIHKAEAANKAGACLVLDDPGRWATAIDMCESLLELKWVVSSVLEEQK
AAPNLADHQWRLLQELVPVLKTVRIAASFLSEDINLSISALMPCLHGVSRVLEQHIAETS
CPVARGVIETVRSGMERQWRLGEEEALLDSPAVLSSFLDPRFKELRFLSPHARSRLHDKV
KELLSAQAQIEVEEMSRECDKGGEDEDGEEGREKEVRNRGLDHSQSTIAPLDSPVSCESN
EEGDIIVLQQQLKGLSQTAPSQVSGEGLGEGSRCSAGNGPRRVAGLSSLLKGDLQPPAYR
QVSHVPKSMYDILLGEDPTERMPEIHQQLGNYIAEPLCKRSLSPLHWWRSKEHRFPAVAR
LARTFLAIPATAVPADRAFAPRETTVAQRRAILGPQHLDHILFLHQNSDYVEKLMGGSTG
HEERGSDRNGAKQTLYQSLVSYESKAWVGGEKL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatttccgagggaacatggatttccgagggtaccccctgtccagcagtctggcccca
aatttgaggagaaggggcgaacggggagcaacaggactggttctggataggcgcaagtca
accgtttggaattactacatccagcttaatgagatgtatgttgagtgtaatatatgcaag
aggcagttgtcttttcacaacagcactacgactatgagggagcaccttgtccgcaaacat
aatatacgcgacaacgcgccacctgtacttgataacacagcagtggccggggccccgatt
ccagctacatcactccagccaatggcccagcccggattcccctgcaacatctctactaca
tctgccacagccaacacatgtatgttccagacagatttgcacatagttgtaaaagaggag
cagcaggatgctgacttatctcctgaacaagggatggccaaacgtgcccgaatcacatgt
gctcctcccctagatgtaggaggcggtgccaatgcaatccctgtcaccagccatagtggt
atcaccaccaaagaatccaatggcaagcgtactggggttctgacttacctaatattggaa
atggtgtacagggactttcagccactgtctgtggtggaggagaggggatttcgtcttcta
ttgagctacttagaaccacagtacccagtgccgtctccctctcagcttggcagcctcctt
tggcatcactatgatgttctgaaacggcacctgcagcagtatcttcagtctggcctggct
ccacgttgcataacactttgcactgagtactggcagtctgtagcaggttgtgcggtggga
gcaggcggtcgcctcttcttcactgtaagtgcacattttgttgacaaagactggcgcttg
gcccgttgtgtgctgcagacctgtcccatgcccgatatcagggagaagatttgtgaaaga
gggttcattcaatttggggacacgctgaaggcagttctctctgaattccatcttccccag
agctctgttttctgtgttgtacatgacactcccaggatctcagaggccaaagggactgag
aatatgggagttccgaaagaaaaagttaatcgtactgctggaccacaccaatcacctcag
gatctcccagaaggctgggtagcgttacactgtgcaggggaagccctcaaactctgcatc
caggacggactatgtatggaacctgtcagacaggctcttgcggaggcccgcaggattatc
tcacatttccagcatgatgcacctgctgccgccgctctgatccacaaggcagaagcggcg
aataaggcaggcgcttgtctagtgctggatgacccagggcgctgggcgactgctatcgac
atgtgtgagagtctgctcgagctgaagtgggtggtgagctccgttctcgaggagcagaaa
gctgctccaaatttagcggaccaccagtggcgcctcctccaggaactggtgccagtactt
aagaccgtgcgcatcgctgcctccttcttgagcgaggacatcaatttgtccatctccgcc
cttatgccgtgcctgcatggtgtatctcgtgtcctagagcaacatatcgcagagaccagc
tgccctgtggctcggggagtaatagagacggtgcggtcagggatggagcgacagtggaga
ctgggtgaagaggaagccttactggacagccctgccgtcctctcctcattcctggaccca
aggtttaaggagctgcgcttcctcagcccacatgcacgtagtaggctgcacgacaaggtc
aaggaactattatctgcccaagcacaaatagaggtggaggaaatgagcagagagtgtgac
aaaggaggcgaggatgaggatggcgaagagggaagggaaaaggaagtgaggaatcgggga
ttggatcactcacagtcaaccattgctcctctggattcacctgtgtcctgtgaatcaaat
gaagagggggacattattgtgctgcagcaacagttaaaggggctgtcccagactgccccg
tcacaggtcagtggagagggactgggtgaaggctcgcgctgcagtgctggaaatggtccc
aggagagtagcaggactgtctagcctgttaaaaggagacctgcagccccctgcttatagg
caagtgagtcatgtgcccaaaagcatgtacgacatactgcttggagaggatcccactgag
cgaatgcctgagatccaccaacagctggggaactacattgcagagccgctgtgcaaacgc
agcctgtcacctctccactggtggcgctctaaggagcatcgcttccctgccgtggccaga
cttgcccgcacatttctggctatccctgctactgctgtgcctgcagacagggcctttgct
cctagagagactactgttgctcaacgcagggccattctggggccccagcatttagatcat
attctattccttcaccagaacagtgactatgtggagaaactgatgggagggtctacaggg
catgaagagaggggcagtgacaggaatggagccaagcagactctgtatcagtctttagtg
tcctatgagagcaaggcttgggtgggaggggagaagttgtga
DBGET
integrated database retrieval system
