Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418627
Help
Entry
139418627 CDS
T10872
Name
(RefSeq) zinc finger and BTB domain-containing protein 20-like
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139418627
04121 Ubiquitin system [BR:
ocla04121
]
139418627
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
139418627
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139418627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
BTB_KLHL33
zf-C2HC_2
zf-C2H2_15
zf-C2H2_2
Zf-C2H2_ZNF451_2nd
zf-met
zf-C2H2_jaz
zf-C2H2_11
BolA
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
139418627
NCBI-ProteinID:
XP_071024332
LinkDB
All DBs
Position
10:46114784..46149966
Genome browser
AA seq
684 aa
AA seq
DB search
MTERIHNINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEVPSVVSVQSIQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGLAGPGGFPVNPGDSGQETPRGTPESGTSGPSSDAESVYMQATSQQNLERAYTSHY
SYSGLSLQNGTRERSHYVTSMTTSYDPALGTQKDQHDQDPPWITRIHERSQQMERFLSTP
ETTHCRKQPRPVRIQTGGVHIKQEAEDEYSSYGMDECTEDTEHVEGVESEPKGESFDSGV
SSSIGTEPDSVDQQQYLLGFGREGVGEGQQCEGTPVQIDVNDSSPEQMHETEDRGTSHGT
SDSNMLQPLPNPIMAQSLPSAPLYMRQAESHTSNLRMPLTMTSNTQVMGTANNSYLPNLF
ATQSASNNKPFLFSLPQSMGGQQTQFVAVPPPCMPPFSQQLMVQQQAAREQQQAAQMGQG
EKKPYECTLCTKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRA
YQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSTAGAVTGL
SGAAGAGGPVSIPMAVPEPGAGVVALAMPVSGGAGIVGGVGTGVGVAAEASCQEGTTYVC
SVCPAKFDQIEHFNDHMRMHVSDG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcgcattcataacatcaatctccacaacttcagcaattctgtacttgagacc
ctcaatgagcagcgcaaccgcgggcacttctgtgacgtgactgttcggatccatggaagc
atgctgcgagcccaccgctgcgtgctggccgctgggagccccttcttccaggacaagctg
ctcctgggctacagtgacattgaggtcccctcggtggtctcggtgcagtccatccagaag
ctgatagacttcatgtacagcggggtcctgcgggtttcccaatcggaagctctccagatc
ctcactgctgccagcatcctgcagatcaaaacggtcatcgatgagtgcacccgcatcgtg
tcccagaatgtgggcctggccgggccaggggggttccctgtcaacccaggagactctggg
caggagacgccccggggcacacctgagtcaggcacctctgggcccagcagcgatgcagag
tcagtgtacatgcaggccacgtcccagcagaacctagagcgtgcgtacacatcgcattac
tcctactccggcctttcactgcagaatggaacccgtgagcgctcccactacgtaaccagt
atgacaacaagctacgacccagccctcggcacgcagaaggaccagcatgaccaggacccg
ccgtggatcacccgcatccatgagaggtcacagcagatggaacgcttcctatccacccct
gagaccacccactgccgcaagcagccccgaccggtacgcatacagacaggaggcgttcac
ataaagcaggaggcagaggacgagtacagcagctatggtatggatgagtgcacagaagac
acagaacacgttgagggtgtggagagtgagccgaagggtgaaagctttgactcaggggta
agctcctccatcggtactgagccagactccgtggatcagcagcagtacctgcttggcttt
gggagggaaggggttggagaggggcaacagtgcgaggggaccccagtgcagatcgatgtc
aatgactcctccccagagcagatgcatgagacggaggacaggggcacatcccacggcact
agcgacagtaacatgttgcagcccctgcccaacccaatcatggcccagtccctgccaagt
gccccactctatatgcgtcaggccgaatctcacaccagcaacctgaggatgccgctcacc
atgaccagcaacacccaggtaatgggcacggccaacaactcctacctgcccaacctcttt
gccacacagtcggccagcaacaacaagcccttcctcttcagcctgccacagtccatggga
ggccaacagacccagtttgtggccgtgccgcccccttgtatgcccccattctctcagcag
ttgatggtacagcagcaggcagcgcgggaacagcaacaggcggcccagatgggacagggg
gagaagaagccctatgagtgcactctatgcactaaaacctttactgctaaacagaactat
gtcaaacacatgtttgtgcacactggtgagaaaccacatcagtgcagcatctgctggcgc
tcgttctccctgaaggattacctaatcaaacacatggtcacacacacaggggtgcgtgcc
taccagtgcagcatctgcaacaaacgcttcacccaaaagagctccctcaacgtccacatg
cggctgcaccgtggagagaagtcctacgagtgctacatctgcaagaagaagttctcgcac
aagaccctgctggagagacacatggctctgcacagcacagcgggcgccgtcacagggctg
tcgggggcagcaggcgccggtggtcccgtctccattcccatggccgtgcccgaacccggc
gccggagtggtggccctcgccatgcccgtcagcggaggcgccggaatagtgggtggggtc
ggaacaggagtgggtgtggctgcggaggcaagctgccaagaagggaccacctacgtgtgc
tccgtctgtcctgccaagttcgaccaaattgagcacttcaatgaccacatgcgaatgcat
gtctccgatggataa
DBGET
integrated database retrieval system
