Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418655
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Entry
139418655 CDS
T10872
Name
(RefSeq) ras and Rab interactor 2-like
KO
K17638
Ras and Rab interactor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418655
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139418655
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Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
139418655
NCBI-ProteinID:
XP_071024375
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All DBs
Position
10:47359854..47367363
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AA seq
815 aa
AA seq
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MQEDPVYDFPEPVGELVGERRACPQRGSLKNISVLDRLLLTHPVWLQLSINSATALHILQ
REPPGTFLVRKSNTSQKKVLCVRLADDSVPSFVKQFVIREVDSTFSLEKAAIGFPDLFRL
IAFYCVSRDVLPFPLELPEAIVKASSHKQLESISHMGVEFWSSQLNFRGPRNGPPPVEAA
PLPPSPTPEDCATPQESPTLFQEFCPIQTRSPRELNCGAAGQGALCFINPLFLQSHPALH
KRHQFKRSLKVRVSTENSSPLSPPVAPPPPPPLLAKTNIKSKKVQRASGAVEARVEGEGG
TAPVQEDSDYLQPCLVLPVLPQKTRVTPTLSPTAEEDYHVPLGLLQGLAQEKGGEEEVGL
LLEQRYAPSLSELDSSSSLSSLEEAEESSERIPLTRGTSNPSPPCTLPPRQPVSVLRKLS
AVFVSFFVPEKRVARLVEDLSRDRRIAFGVLVQDFLRQQREAIKPQCQRSSVELLQGIRF
FLSQAKTFLLDCGDLEPPIETMVPDDEKDLVLEKAMFRCVLKPLKGQIDRTLQTLHERDG
STQSMAESLAVARGKTPLECFGVRVGVPDAAGVEKVRQKLALMRRAYSPIDKVVLLLQVC
KLIYKAMTGNSGKEFGADDFLPALSYVIVQCNMPELSVEVEYMMELLESSWLTGEGGYYL
TSVYASLCLIQSLPEEMPSSGLTQGARDSLKDWSRRRSSQALSQKKIQEQLRFVKVLFQD
GESSWIKTLQWRAGVSGEALTQLCAAKFGVDDPGLFKLYWRSEGEIQALPAQAQIQDLQG
QGSSGTPLIYQKAKQDGLKTCKLTREAAVDLVESP
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggacccggtgtatgatttccctgagccggtcggggagctggtaggagagagg
agggcttgtcctcagcgtggctccctgaagaacatcagtgtgctggaccgtctgcttctc
acacaccccgtctggctgcagctgtccatcaactctgccaccgctctgcacatcctacag
cgggagccgcctgggacctttctggtgcgcaagtccaacacctcgcagaagaaagtgctg
tgtgtcaggcttgcagacgacagcgttccctcctttgtcaaacaatttgtcatccgcgaa
gtggactccaccttctctttggagaaagcggctatcggtttccctgacctcttccggctc
attgccttctactgtgttagccgggatgtgttgcccttcccactggagctccctgaggcc
atagtcaaggcttcatcccacaaacagctggagtccatttcacacatgggcgtggagttc
tggagttcccagctgaacttcagaggtccacgcaatgggcccccaccagtcgaggcggca
ccgctgccccctagccccacccctgaggactgtgccacgccccaggagagccccaccctg
ttccaggagttctgccccatccaaacacgcagcccccgggagctgaactgtggggcagca
ggccaaggggctctctgtttcatcaacccactcttcctgcaatcccatcctgcactgcac
aaacgccaccagttcaagcgcagcctcaaggtgcgtgtctcgactgagaactctagccct
ttgtccccaccagttgcccctccccctcccccacctctgctggccaagacaaatattaag
agcaagaaggtccagcgggccagtggagcagtggaagccagagtggagggtgagggaggg
acagcacccgtccaggaggactcagactatttgcagccatgcttggttcttccagttctt
ccgcagaagaccagggtcacacccacactgtctcccactgcagaggaggactaccatgtg
ccattaggtctcctgcagggactggcccaggaaaaaggaggtgaggaggaggtgggtctc
ctgctggagcagaggtatgctccctccctgagtgagctggacagcagcagttccctcagc
agcctggaggaggcagaggagagctcagagcgaattcccctcaccaggggtaccagtaac
ccctcacccccatgcaccttgcccccacgccagcccgtctcagtcctgcgcaagctgagt
gcagtcttcgtgtccttcttcgtgccagagaagcgtgtggcgaggctggtggaggacctg
tcccgtgacaggaggattgcgtttggtgtcctggtgcaggatttcctcaggcagcagcgg
gaggcgatcaagcctcagtgccagagatctagcgtagagctactgcagggcattcgcttc
ttcctctcccaggccaagaccttcctgctggactgtggagacctagaacccccaattgag
accatggtgcctgatgatgagaaagacctggtgctggagaaagccatgttccgctgtgtg
ctgaaacctctgaagggacagatagacaggacactgcaaactctgcatgagcgagacggt
tccacccagagcatggcagagagcctggctgtggccaggggaaagaccccgttggagtgt
tttggagtgcgggtgggagtgccggatgctgccggtgtggagaaggtgcggcagaagtta
gctctcatgaggcgggcttactcgcccattgacaaggttgtgctgctactgcaggtctgc
aagctcatctataaagccatgacgggcaattcaggcaaggaattcggtgcagatgacttc
cttccagccctgtcctatgtcattgtacagtgtaacatgccagagctgtctgtggaggtg
gagtacatgatggagctgctggagtcatcgtggctgacaggggagggtgggtactacctg
accagtgtgtatgccagcctgtgcctgatccagagcctgcctgaagaaatgccctctagc
gggctgacccagggggccagagattccctgaaagactggagccggcgccggagcagccag
gctctgagccagaaaaaaatacaagagcaactgaggtttgtcaaggttctgtttcaagat
ggagaaagcagctggataaaaaccctgcagtggagggcaggagttagtggggaggccctg
acccagctctgtgctgctaagtttggggtggacgacccaggactgttcaagctgtactgg
cggagtgagggggagattcaagccctcccagcccaggcccagatccaggacctacagggc
caaggcagcagtggaacacccctcatataccagaaagccaaacaggatggactcaagact
tgcaaactaacaagagaggcggctgtggaccttgtggaatcaccttga
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