Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418708
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Entry
139418708 CDS
T10872
Name
(RefSeq) claudin-like protein ZF-A89
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecules
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139418708
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139418708
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139418708
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139418708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139418708
04147 Exosome [BR:
ocla04147
]
139418708
04515 Cell adhesion molecules [BR:
ocla04515
]
139418708
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139418708
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139418708
Exosomal proteins of colorectal cancer cells
139418708
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
L1 family
139418708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
DUF4064
Motif
Other DBs
NCBI-GeneID:
139418708
NCBI-ProteinID:
XP_071024462
LinkDB
All DBs
Position
10:49397056..49405333
Genome browser
AA seq
372 aa
AA seq
DB search
MVSAGLQMLGTALGIIGWIGTIIVCAMPMWRVTAFIGSNIVTSQTSWEGIWMSCVVQSTG
QMQCKVYDSMLALSSDLQAARALTIIAILAGIIAILLAVAGGKCTNCVDNEASKAKVGVA
SGVVFIIAGVLCLIPVCWTAHSIIQDFYNPLLVSAQKREAKAMASAGLQILGIVLALIGW
LGDIVICALPMWKVTAFIGNNIVTAQMFWEGLWMNCVTQSTGQMQCKVYDSMLAIPQDLQ
AARSLVIISILVALIGILLSVAGGKCTNCIEDEEAKSKVAIASGVFFLVSGVLCLIPVSW
SSNTIIRDFYNPLLTDPQRRELGASLFIGWGSAGLMLIGGAFLCCQSPQREESVYSAKYS
APRFTASGRAHV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggctgggctacagatgctgggcactgcccttgggatcataggctggattggg
accatcattgtttgtgccatgcccatgtggagggtcaccgccttcatcggcagcaacata
gtcacctcgcagacctcctgggagggtatctggatgagctgcgtggtccagagcacgggc
cagatgcagtgtaaggtctacgactccatgctggccttgagctctgacctacaggccgcc
agagctctgaccatcattgccatcctcgccggcattattgccattctgctggccgtagcc
gggggcaagtgcactaactgtgtggataacgaggcgtccaaggctaaagtgggtgtggca
tccggggtggtgttcatcattgccggagttctgtgcctgatccctgtctgctggacggcc
cacagcatcatccaggacttctacaacccgctcctggtaagcgctcagaagagggaagcg
aaagcaatggcctccgctggtctccagattctgggcatcgtcctggctcttatcggttgg
ctaggggacattgtcatctgtgcgctccccatgtggaaggtgactgctttcataggcaac
aacattgtgacagcgcagatgttctgggaaggcctgtggatgaactgcgtgacacagagc
acgggccagatgcagtgtaaagtctacgattccatgctagcgatccctcaggacctccag
gccgccagatctctggtgatcatctccatcctcgtggccctgatcggcatcctgctctcc
gtggcaggcgggaagtgcaccaactgcatcgaggacgaggaggccaagtccaaggtggcc
attgcatccggcgtgtttttcctggtctctggcgtcctctgcctgatccccgtgtcctgg
tcatccaacaccattatcagggacttctacaacccgctgctcaccgacccgcagagaaga
gagctgggagcttcactgttcataggatggggctctgctggcctaatgctcatcggaggc
gcatttctctgctgccagtctccccagcgtgaggagagtgtgtactctgccaaatattct
gcccctcgcttcactgccagtggaagggcccatgtctga
DBGET
integrated database retrieval system
