KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418720
Entry
139418720         CDS       T10872                                 
Name
(RefSeq) gamma-aminobutyric acid receptor-associated protein isoform X1
  KO
K08341  GABA(A) receptor-associated protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04068  FoxO signaling pathway
ocla04136  Autophagy - other
ocla04137  Mitophagy - animal
ocla04140  Autophagy - animal
ocla04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    139418720
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139418720
   04136 Autophagy - other
    139418720
   04137 Mitophagy - animal
    139418720
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    139418720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139418720
   04121 Ubiquitin system [BR:ocla04121]
    139418720
   03029 Mitochondrial biogenesis [BR:ocla03029]
    139418720
Membrane trafficking [BR:ocla04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    139418720
Ubiquitin system [BR:ocla04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   139418720
Mitochondrial biogenesis [BR:ocla03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    139418720
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 139418720
NCBI-ProteinID: XP_071024475
LinkDB
Position
10:complement(49778680..49782967)
AA seq 122 aa
MKFLYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQF
YFLIRKRIHLRAEDALFFFVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYGNSQT
KV
NT seq 369 nt   +upstreamnt  +downstreamnt
atgaaattcctgtataaagaggagcacccatttgagaagagaagatcggagggggaaaag
atcaggaagaagtaccctgatagagtgccagtgatagtggagaaagcccccaaagccaga
attggtgatttggacaagaagaaatatcttgtaccctctgatcttacagtgggacagttc
tacttcctaatacggaagaggattcacctgcgggcagaggacgcccttttcttctttgtc
aacaatgtcattcctcccacctcagccaccatgggactactttaccaggaacaccacgaa
gaggacttctttctttacattgcctacagtgacgagagtgtctacggaaacagccaaacg
aaagtctag

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