Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418756
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Entry
139418756 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 15-like isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418756
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139418756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_9
SH3_2
RepB_C
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
139418756
NCBI-ProteinID:
XP_071024533
LinkDB
All DBs
Position
10:52247575..52287349
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AA seq
1105 aa
AA seq
DB search
MIVSRLRPRSVVPPKPSNLKSLGPNIPNHFQTRNQNSPNLNQNQPPSGERSQERKQHQLP
EGKVKRIVRKFSNQEYEVMGQAGLETRTGVEAGAETVTGAKQGDGGVVGWTRTEAGQQAD
SNRGQTRAQQADYDAIIMSTVELSLIPPPVPLRKPRSGPHTQPTAQPTAQSDAVPLRQKT
DNHLGTLLTPGHGQGNRSAPDGSEVDEAPVCVTIESRQTTGSAATPSGHHGNMTQCQCIC
HLRRTGMKLVWVPLEEEEDNYVEVIGDEEKDKRGNEHQKRVVKEGKEEDEDDYIEVTGDE
EKEKRGNQDQKRERKEVNEEMLGSFRADERRGKSEHREVRVHKVSENNSQRSFPSKHNTS
SNAESSLALMICSQHSSYQHSTQQHSSNTKHSSHQHSSHQHSSHTRPPQNKTETYDEVTY
EAMSMSDREEPHPPPLPRLMKPPLMHKTQHPSPPKDNLQSMSTPSLSGLITSISKSDIQK
STPSPQTPPSISHGNPHQPILRPLPPLPVLHDLCLLPCPIMPRPQLRPQISMKPLPPNPE
PSGPSCLSRHSSTDADVRDDWVTVDEEDVEEPQEQADSPRRISSDWGPLRLDEPLYQIYQ
AKSIKEAIQLQSISRSASRATVDLHMRLRGGGSLGAPKGPSFRARNGPAEVTLWQELPVV
RDSGILERLSPEELQRQESMFEVLTSEASYLHSLNVLTDHFLMCRDLDDTLVIHDKKTLF
SNILHVYEVSQRFLKDLLSRIDENILITDVCDIIHQYALYDFSVYIDYIRNQGYQERAYS
SLMQTNNPFALVMRRLEESPLCRRLPFSSFLLLPFQRITRIKILVQNILKRTKEGTREEN
TASRALTSVSEIIKESNTQVGQMKQMEELIQVNNTLEFNKLKAVPIVSKARFLEKRGELY
ELSKGASLFSSRLKLTPIYLFLFNDLLIITCKKSSERYMVTDHTHRSLVQVQPAGFGAGA
EDPGPKLEHSFCLLLLENHRGMACEHLLKAPSESDMHRWMAAFPSLNDPTRKEEVVYEDW
DCPQVQCVEQYVAQQADELTMEPADIINVLCKTHEGWNKGMRLSDGEKGWFPSKSVVEIT
NEHRRRRNLREQYRITQAAAKVTKN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgtcaagacttcgacccagatccgtcgttcccccaaagccttctaacctcaaa
tccttggggccaaacatcccaaaccacttccagaccagaaaccagaacagtccaaacctg
aaccagaaccaacccccatcaggggagaggagccaggagaggaaacaacatcaactaccg
gaggggaaggtgaagaggattgtgcgtaagttcagcaaccaggagtatgaggtgatgggg
caggcaggactagagacaagaacaggtgtagaggcaggggcagagacagtgactggggca
aagcagggagacggtggggtggtggggtggacaaggacagaggcaggacagcaggcagac
agtaacagaggacagacaagggcccagcaggctgactatgatgctataataatgagcact
gtggaactcagcctcataccacctccagtaccattgagaaagccacgttctggccctcac
acacaacctacagcacaacccacagcacagagtgatgccgtgcccctgaggcagaagaca
gacaaccatctgggcacccttctcacacctggacatggacaaggaaacagatcagctccc
gatggtagtgaggtggatgaagcgcctgtgtgtgttaccattgagagcagacaaaccaca
ggctcggcagccacccctagtggtcaccatggcaacatgacacagtgccagtgcatctgt
cacctgaggagaactggcatgaagttagtctgggttcctctggaggaagaggaagataac
tatgtagaggtgataggggatgaagaaaaagacaaacgagggaatgagcaccagaagaga
gtggtgaaggaggggaaggaagaggatgaagatgactacatagaagtgacaggggatgaa
gagaaagaaaaacgagggaatcaggaccagaagagagagaggaaggaggtgaatgaagag
atgttgggatctttcagagcagatgagcgaagggggaaaagtgagcacagagaggtcaga
gttcacaaggtcagcgagaataacagccagagatccttcccttcaaaacataacacatca
tccaacgcagaatcttccctggccctgatgatctgctcacagcacagctcatatcagcat
agcacacaacagcacagctcaaacaccaagcacagctcacaccagcacagctcacaccag
cacagctcacacaccagaccccctcaaaacaaaactgagacatatgatgaggttacatat
gaggccatgtccatgtctgacagagaagaaccacatccacccccactcccacgcctaatg
aaacctccactgatgcacaagacgcagcatccctctcctccgaaggataatctccagagc
atgtccacgccctctctctctggcctaataacctcaatttcaaagtcagacatccagaag
agtaccccttcccctcagactcctccctccatctcccatggcaacccccatcagccaatc
ctgcgacctctgcctccacttcctgttttacatgatctctgccttctcccctgccccatc
atgccccgccctcaactcagacctcagatttcaatgaaacctcttccacctaaccctgag
cccagtggtcctagctgtctcagccgacactcatccacagatgctgatgttagggatgac
tgggtgactgtagacgaggaggacgtagaggagccacaggaacaggcagatagtcccagg
aggatctcctcagactggggacctttgaggctggacgaacctctgtaccagatctaccag
gctaagtccatcaaggaggcgatccagctccagagcatcagccggagtgccagtagggcc
accgtggacctccatatgaggctcaggggcggtgggtccttaggggcccctaagggcccg
tccttcagggccaggaatggccccgcagaggtcacactgtggcaggagctaccggtggtc
agagacagtgggatcctggagagactcagtccagaggagctgcagagacaggagagcatg
tttgaagtattgacatcggaagcctcgtacctccactcactgaacgttctcactgatcac
ttcctgatgtgtcgggaccttgacgacacactggtgatccatgacaagaagaccctcttc
tccaacatactccatgtgtatgaggtcagccagaggttcttgaaggatcttctgagtagg
atcgatgagaacattctgataactgatgtgtgtgacatcatccaccaatacgccctgtac
gacttctcagtctacattgattacatccgtaaccagggttaccaggagagggcctacagc
tccctcatgcaaaccaacaacccatttgcgttggtgatgcggaggctggaggagtctcct
ctatgtcgtcgtcttcccttctcctcctttctgctccttcctttccagaggatcacacgc
atcaagatccttgtacagaacatcctgaagaggactaaagagggcactagggaggagaac
actgcctctagagccctgacctcagtgtctgagatcatcaaggagtccaacacacaggtg
ggccagatgaagcagatggaggaactcatacaagtcaataacacattggagttcaacaaa
ctcaaggctgttcccattgtctcaaaggctcgcttcctggagaagagaggagagctatat
gagctatccaaaggggcctccctattcagttctcgtctcaaactcacccccatctacctc
ttcctctttaatgacctactcatcatcacatgcaaaaagagctcagagcgctatatggtg
acagaccacacccaccgctccctggtgcaagtccagcccgcggggtttggggctggagcg
gaggacccagggcccaagttggagcactccttctgtctgctactgctggagaaccaccga
ggcatggcctgtgaacacctgctgaaggccccctcagagtcagatatgcaccggtggatg
gcagcattcccttccctaaatgacccaaccagaaaggaagaggttgtttatgaggactgg
gattgcccccaggtgcagtgtgtggaacaatacgttgcccagcaggctgatgagctcacc
atggagcctgctgacattatcaacgtgctatgcaagacccatgagggttggaataagggg
atgcgtctgtctgacggagagaagggttggttccctagcaaaagcgtggtggagataacc
aacgagcatcggaggagacggaaccttcgggagcagtaccgcatcactcaagctgcagct
aaagtcacaaagaactga
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integrated database retrieval system
