KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418771
Entry
139418771         CDS       T10872                                 
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a isoform X1
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061  Fatty acid biosynthesis
ocla00071  Fatty acid degradation
ocla01100  Metabolic pathways
ocla01212  Fatty acid metabolism
ocla03320  PPAR signaling pathway
ocla04146  Peroxisome
ocla04216  Ferroptosis
ocla04920  Adipocytokine signaling pathway
Module
ocla_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    139418771
   00071 Fatty acid degradation
    139418771
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    139418771
  09143 Cell growth and death
   04216 Ferroptosis
    139418771
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139418771
   03320 PPAR signaling pathway
    139418771
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ocla01004]
    139418771
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139418771
Enzymes [BR:ocla01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     139418771
Lipid biosynthesis proteins [BR:ocla01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   139418771
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139418771
  Exosomal proteins of breast cancer cells
   139418771
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 139418771
NCBI-ProteinID: XP_071024558
LinkDB
Position
10:complement(52932909..52990626)
AA seq 697 aa
MQAQELLRQLRIPELEDVRQYMHSLPTNMLMGVGALAALTTYWYATRPKALKPPCDLNMQ
SVAMAGDGYVRRSILNNDDEHMTHYYSDARTMYEVFLRGLRVSNDGPCLGSRKPNQPYEW
LSYREVADKAECIGSALLHRGHSQTGDKHIGIFSQNRPEWTISELACYTYSLVCVPLYDT
LGLEAIEYIIDQAAISTVICDLAEKARLILDCVSGKEHTLKTIVLMEAFDEELMARGQQS
SIEILSLKDVEAVGKAHHHQPLPPTPEDLALICFTSGTTGNPKGGMLTHGNVIANCAAFI
KITESILKPSTKDVLISFLPLAHMFERVFEGVILVHGARIGYFQGDIRLLMDDLKTLQPT
VFPVVPRLLNRMFDKIFGQANTPLKRWLLVFASRRKHAEMMNGIVRKDSLWDKLIFQKVQ
NSLGGRVRLMITGAAPVSPTVLTFIRAALGCQFYEGYGQTECTAGCTMSMPGDWTAGHVG
APLPCNYVKLVDVTEMNYFAANGEGEVCVKGPNVFKGYLNDPEKTKEALDQDGWLHTGDI
GKWLPNGILKIVDRKKHIFKLAQGEYIAPEKVENIYIRSDPVAQIFVHGDSLQACLVGIV
VPDPDFLPGWAKKKGIEGSYLEMCASKEMKNAILEDILRLGKEGGLKSFEQVRDISLHTE
MFSVQNGLLTPTLKAKRTDLRSHFREQIDLLYAKIKM
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgcaggcccaggagctcctgagacagctgcggatcccagagttggaggatgtgcgccag
tacatgcacagcctgcccaccaacatgctgatgggtgtgggcgcccttgccgccctcacc
acctactggtacgccacgcggcccaaggccctcaagccgccctgcgacctcaacatgcag
tcagtggccatggcgggtgacggttacgtcaggcggtctattctgaataacgacgatgag
cacatgacacactactacagtgacgcgcggaccatgtacgaagtattcctccgaggcctg
cgggtgtccaatgatgggccctgtctaggatcacgaaaacccaaccagccttacgagtgg
ctgtcataccgagaggttgcagacaaagccgagtgcattggctcggctctcctccacagg
gggcactcccagactggagacaagcatatcggcatcttttcccagaacaggccagagtgg
accatttcagagctggcctgttacacatactccctggtgtgtgtaccactgtatgacacg
ctaggccttgaggccattgaatacatcatcgaccaagccgccatctctacggtgatctgt
gacttggcggagaaagcgcggctcatcctggactgcgtgagcggcaaggagcacacattg
aagaccatcgtgctcatggaggcctttgacgaggagctgatggcccgcgggcagcagagc
agcatcgagatccttagcctgaaggatgtggaggctgttggcaaggcccaccaccaccag
ccattgcccccaacaccagaagacctggcactcatctgcttcactagtggaaccacagga
aacccaaagggtggaatgcttacacatggcaatgttattgccaattgtgctgctttcatc
aagataacagagagcatactcaagcccagcactaaggatgtgctcatctccttcctgcca
ttggcccacatgtttgagagggtttttgagggagtgatcctggtgcacggtgcacggatt
ggctacttccagggggacattcggctcctgatggacgacctgaagaccctgcagccaaca
gtcttccctgtcgtcccccgcctgctcaaccgcatgtttgacaagatcttcggacaggcc
aacacgccactgaaaagatggctgctggttttcgcctccaggaggaagcatgcggagatg
atgaatggcatagtcaggaaggacagcttgtgggacaagctcatcttccaaaaagtccag
aacagtcttgggggtcgtgtgaggctgatgatcacaggagcggccccagtgtctccaacc
gtcctgaccttcattcgggccgctcttggctgccagttttacgaaggctatggtcagact
gagtgcacagccgggtgcaccatgtccatgcctggggattggacagcaggtcatgtgggg
gctccactgccctgcaactatgtaaagctggtggatgtgactgagatgaactactttgct
gccaatggggaaggagaggtgtgtgtgaaaggaccaaacgtattcaagggctacctgaat
gacccggagaagacaaaggaggccttggatcaggatggctggctccacaccggagacatt
gggaagtggctgcctaatggtattctgaagatcgtggacaggaagaagcacatcttcaag
ctggctcaaggagagtacattgccccggagaaggtcgagaacatctacatccggagcgac
ccggtggcccagatctttgtccatggcgatagcttgcaggcatgcctggtgggcattgtg
gtgcctgatccagacttcttaccaggatgggcaaagaagaagggcatcgagggttcttat
ttggagatgtgtgcaagcaaggagatgaaaaatgccattctggaggacattctgaggctg
gggaaagaaggggggctgaagtcttttgagcaggtgagagatatctcgctgcacactgag
atgttctccgtccagaacggcctcctgacgcccacgctaaaggccaagaggaccgacctc
cgcagtcacttccgagagcagattgacctgctctatgccaagatcaagatgtga

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