Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418857
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Entry
139418857 CDS
T10872
Name
(RefSeq) PDZ and LIM domain protein 3-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139418857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139418857
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
139418857
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139418857
NCBI-ProteinID:
XP_071024714
LinkDB
All DBs
Position
10:59743028..59759173
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AA seq
353 aa
AA seq
DB search
MTKLSHCSVYENPAVFGGHTHTHTPVYFQLQGQGTEGDMPLDVVLNGPAPWGFRLTGGKD
FNQPLTIFRITPGSKAAVANLCPGDVILAIEGVPAEDMMHCEAQNKIKDAMYQLILTVQR
PETRLWSPQVTEDGKANPFKINLEAEQQEFKPIGTGHNRKAQPFVAAANIDDHRQVVSTA
YNTPIGLYSSGNIQDAMHGQMRGLVQDKPEGSKTLSSIEESDVYRMLLKDQEEPQEPRQS
GSFKALQDFVDSDGTRPMVTRTVRAPMTKPPPPTGNLQKLPMCDKCGNGIVGTVVKARDK
FRHPGCFVCTDCDVNLKQKGYFFVEGQLYCETHARARTRPPEGHDLITTFPSA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgactaagttgtcccactgctctgtttatgagaaccctgctgtgtttgggggacacaca
cacacacacacaccagtgtacttccagctacagggacaagggacagagggggacatgcca
ctggacgttgtcctgaacggcccggccccgtggggtttccgactgaccgggggcaaggac
ttcaaccagcccctcaccattttcaggatcactccgggcagtaaggcggcggtggccaac
ctgtgtcctggtgatgtcatcctggccatcgagggcgtcccggcggaggacatgatgcac
tgtgaggcccagaacaagatcaaagacgccatgtaccagctcatcctcaccgtccagaga
ccagaaaccaggctatggtcgcctcaagtcacggaagacgggaaagccaacccgttcaaa
atcaacttggaggctgagcagcaggagttcaaacccattggtacgggtcacaatcgcaag
gcccagccctttgtagctgcagctaacattgacgaccatcgtcaggtggtgagcacagcc
tacaacacccccataggcctctactcctcaggcaacatccaggacgccatgcacggacag
atgaggggcctggtccaggacaagccagagggtagcaagacgctgagctccatcgaggag
tctgatgtgtaccgcatgctcctgaaagaccaggaggagccccaggagccccggcaatcc
ggttccttcaaggccctgcaggacttcgtcgacagcgacggcactcgccccatggtgacg
aggacagtgagagcgcccatgactaagccaccgccgcccacaggaaacctgcagaaactg
cccatgtgtgacaagtgtggaaacggcattgtgggcacagtggtgaaagcgagggacaag
ttccgtcaccctggctgcttcgtgtgcaccgactgtgacgtcaaccttaaacagaagggc
tacttcttcgtggagggccaactgtactgcgagacccacgctcgtgcccggacgagaccc
ccggagggccatgaccttatcaccactttcccctcagcatag
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