Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418870
Help
Entry
139418870 CDS
T10872
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
139418870
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
139418870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139418870
NCBI-ProteinID:
XP_071024727
LinkDB
All DBs
Position
10:60376418..60398504
Genome browser
AA seq
704 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTTKFSGPLLS
FEVSDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDTATTEEGPE
PVEVFRDRVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPY
TTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMTEEEVEK
RYGGKLSKNMSGSLYEMVGRVMKALVNKKITVPGNFLGHSGTQCITCSYKASSGLLYPLE
RGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREEYGKLFD
FVTAKKLSIKNRGFKEGIKGKDDMLEDSDEDQHDAYLERMKEEGKIREEANDSDDSDGES
DESFNPGEEEDDIAEEYDSKASASDSSAEGGDSDREKKKRPAKKAKVVKERKPRKKKPKD
SGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKVEWDGKAEEA
KKNYEVAMREYRESGGGSSAPSKKERKKKGGKSDEKNKKGTSGGGRERERERTTGNDSFK
SREFISSEESSSESDRGKGKRKRKGSDELEEVASTPPSSDSGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgtctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagctgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccgggcacatctacaaatatgacggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgagcgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaatgatgaggcagaggtgtcgctg
atggaggtccgcttctatgtcccgcccggggacactgccaccacggaagaggggccagaa
cctgtggaggtgtttagagaccgtgtgctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatctttaaagagctgcagtgtctcacgcccaggggcaggtatgatatc
cgtatctacccaagcttcctccacctccacggtaagacgtttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctagacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggaggaggtggagaag
cgttatggggggaagctcagtaagaacatgtcaggttctctctatgagatggtcggcagg
gtgatgaaggctctggtcaacaagaagatcaccgtgccaggaaacttcctgggtcactcg
gggacccagtgtataacgtgttcctacaaagcgtcgtcaggcctgctctatcctctggag
aggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcgtgt
gtgaacttcgccagaggcaccaccaccacgcgctccttcgactttgagatcgaaaccaag
cagggcacccagttcaccttcagcagcattgagagagaggagtatgggaagctttttgac
tttgtgaccgccaagaagctcagcatcaagaacagagggttcaaagagggtataaagggt
aaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggagaggatg
aaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatggagagagt
gatgagtcttttaaccctggagaggaggaagatgacatagcggaagagtatgacagtaag
gcatcagccagtgacagcagtgcagaggggggagacagtgacagagaaaagaagaagaga
ccagccaagaaggccaaagtggtgaaggagaggaaaccacgcaagaagaagccgaaggac
agtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagccgcgag
agcatcaaagcagagcaccctgggatatccatcacagagatctccaagagggccggggag
atgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggaggaggcg
aagaagaactatgaggtagcgatgagggagtacagagagagtggaggaggatcctctgcc
ccctccaaaaaggagaggaaaaagaagggagggaagagtgatgagaagaataagaagggg
acgtctggtggagggagggagcgagagagggagaggacgacaggaaacgacagctttaag
agcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaagggcaaa
cgcaaacgcaagggttcagatgaactagaggaggtggcctcgaccccacccagttctgac
tcaggatcagactga
DBGET
integrated database retrieval system
