Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139418878
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Entry
139418878 CDS
T10872
Name
(RefSeq) vacuolar protein sorting-associated protein 37C-like isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139418878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139418878
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139418878
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
139418878
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139418878
Exosomal proteins of colorectal cancer cells
139418878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
Fe_bilin_red
Motif
Other DBs
NCBI-GeneID:
139418878
NCBI-ProteinID:
XP_071024742
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All DBs
Position
10:60616704..60626271
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AA seq
360 aa
AA seq
DB search
MIDSGPGKSMDKLQDLSQSELEDLLDNTERVESMALESDEIQNIQLEREMALASNRNLAE
QNLDMKPRLERQREHLVERYSELEGVRDTYRQHCDQKDGIMGQASPEGLFSRLQTEGAST
ETESESLADEFLDGRLSLDSFLDRFLSLRSLAHKRRVRIEKLQDILRQKKETAAGDASAG
SVTSQTSANQDPATTQSSPWNHHPQQQQPQQNSNPNNHAGFQNGPGSTLPYTPYPVSPPN
PTATSAVSGPVPSIPPGQFPPYPSPGSPFTSAAGYSARPAFGPPATACPYPTQPTFPGVP
GSGSAFGQYSAPNTAPYPSAYTYGGVGGYSYPTGPALPNSQSPTGRPQYRPGFGVPQPYS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgattgacagcggtcctggcaaatcaatggacaagcttcaggacctcagccaatccgag
ttggaggatttgctggacaatacagagcgggtggagtccatggcattggaatctgatgag
attcagaacatccagctggagagggagatggcactggcctccaaccgtaacctggcagaa
cagaacctggacatgaagcctcgcctggagagacagagagaacatctagtggagagatac
tctgaactggagggagtcagagatacctacagacaacactgtgaccagaaagatggcatc
atggggcaggcatcaccggaggggttgttctccaggcttcagacagagggcgccagcacg
gagacggagtcagagtctctggcagatgagtttctggacggccggctgtctctggactcg
ttcctcgaccgtttcctctccctccgctccctcgctcacaagagacgggtgcggatagag
aaactgcaggacatcctgcggcagaagaaggagaccgccgcgggcgacgcctccgccggc
tccgtgacgtcacaaacgagcgccaatcaagacccggcgacgacacagtcatcgccatgg
aatcatcatcctcagcaacaacaaccgcagcagaattccaatcccaacaaccacgctggt
ttccaaaacggccccggttccaccctaccttacaccccttaccccgtctcccctcctaac
ccgacagccacctctgcagtatcaggcccagtcccgtccattcccccaggtcaatttcca
ccctaccccagtcccggctcacctttcacctcagcggcgggctactcagcccgtcctgct
tttgggcctccggccactgcctgcccataccccacccagccaacgttccctggtgtcccc
ggctcagggtctgctttcgggcaatacagtgcccctaacaccgccccctacccctctgcg
tacacctacggtggggttggggggtatagctaccccacgggccctgctctgcccaactct
cagtcccccacaggcaggccgcagtacaggcccgggtttggagtgccacagccctactcc
tga
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