Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419003
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Entry
139419003 CDS
T10872
Name
(RefSeq) 5-azacytidine-induced protein 2-like
KO
K12651
5-azacytidine-induced protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139419003
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Gene cluster
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Motif
Pfam:
TBD
FapA
bZIP_2
Tic22
Motif
Other DBs
NCBI-GeneID:
139419003
NCBI-ProteinID:
XP_071024914
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Position
2:4918530..4936768
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AA seq
395 aa
AA seq
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MELGMEAVEDDICILKHETAYGGAGESPVSVCAGDESVASHFALVTAYEDIKKRLRDTER
ENTLLRKRVKQLEDKLRVVPSEGPQYVNKAFSAYRGIYMEKEDLQLELNKLKREKSESER
LLNEQLQAKEMELLQLKTEMETSQVMKSLTSTQDYWQVDRINSELKMHTLQEELERMTLE
KNRLQGHCGDSSGTDCDQNHVESNPSDKAVLQSYEALATEISSLHSVLKQQSDLVKKLGD
KSQLAAHRRAVPTVPVQCLDDVEKNLSHGTVCMTVPRAPSAPPVPSSSGRPCLPPVGPPA
LEGLREDYWPNGPWSSHYPGALGLDSTSPVLLPPPPLNQASLDDSSWSFPSPPKPSDALF
WEGQRQGLSQGSPIHSSRGSTPMSPNGDWAKPPPY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggagcttggcatggaggcagtggaggatgatatctgcattctgaagcatgagacagcg
tacggtggagcaggggagagccccgtgtccgtgtgtgctggggacgagtccgtagcctcc
cactttgccttggtcacagcgtacgaggacatcaagaagaggctgagagacacggagaga
gagaacacactgctgaggaagagagtcaaacaactggaagataagctgcgtgttgtaccc
tctgaaggaccccagtacgtcaacaaggccttcagtgcctaccgtggcatctacatggag
aaggaggacctgcagctggagcttaataaactgaagagggagaagagtgagtctgagagg
ctcctgaatgagcagctgcaggccaaagagatggagctgctgcagttaaagactgagatg
gagaccagccaagtgatgaagtctctaaccagtactcaggactactggcaggtggacagg
atcaacagtgaactgaagatgcatactctgcaggaggagttggagaggatgactctggag
aagaaccgactgcagggacactgtggggattcttctggaactgactgtgaccagaatcac
gtggagtccaaccccagcgataaggcagtgctacagtcctatgaggccctggccactgag
atctcctctctacactcagtgttgaaacaacagtctgacctggtgaagaagctcggagac
aaatcacagctagcagctcacagacgagctgtaccaactgtccctgtgcagtgcctggac
gatgtggagaagaacctgagccatggaacagtctgcatgaccgtgccccgagcccctagt
gccccccctgtcccctccagctctggccggccctgccttccccccgtgggcccaccggct
ctggagggtctcagggaggactactggccaaacggtccctggtccagccactaccctggt
gccttgggtctggacagtactagtcctgtcctcctgcctcctcctcctctcaaccaggcc
tctctagatgactcctcctggtccttcccctccccgcccaaacccagcgacgccctcttc
tgggagggccagaggcagggtctgagccagggcagccccatccactcctccaggggtagt
acccccatgagccctaatggagactgggccaagcccccaccctactga
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