Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419023
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Entry
139419023 CDS
T10872
Name
(RefSeq) mothers against decapentaplegic homolog 1 isoform X1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04081
Hormone signaling
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139419023
09133 Signaling molecules and interaction
04081 Hormone signaling
139419023
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
139419023
NCBI-ProteinID:
XP_071024949
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Position
10:complement(66809354..66840971)
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AA seq
481 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHSMLPRFRNPLHQNEPHMPQNATFPESFSQA
NTQMNFPQTQTHSPGGNSYPGSPGSGSSATFPHSPTSSDPGSPFQMPGEPPGQMPETPPP
AYLPPEERMTQDCPQPMDTNLMVPALPLEISNRPDVQPVAYEEPKHWCSIVYYELNNRVG
EAFQANSTSVLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVY
AECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVY
ELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSV
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctccctgttctccttcaccagcccggccgtcaagcgcctccttggctgg
aaacaaggagacgaagaggaaaaatgggcagagaaagccgtggacgcgctggtgaagaaa
ctgaagaagaagaagggagcaatggaggagttggagagggctctgagctgcccaggtcag
cccagtaactgtgtcaccatccctcgctccctggatggaagactccaggtgtcccacagg
aagggcttaccccatgttatctactgtagggtgtggaggtggcctgacctgcagtctcat
catgagctcaaggctctggagtgctgtgagtacccgtttggctccaagcagaaggatgtc
tgcatcaacccgtaccactacaagagagtggatagtccagtgctgcccccggtgttggtc
ccacggaatagcgagttcaatgccaaacacagcatgctaccacgcttccgcaaccctctg
caccagaacgagccccacatgccccagaacgccaccttcccagagtccttctcccaggcg
aacacacagatgaacttcccccagacacagacacactcccctggggggaacagctacccc
ggctcccctggtagtggcagcagtgcaaccttcccccactcccccaccagctctgaccca
ggcagcccatttcagatgccaggtgagccgccaggtcagatgccagagaccccccctcca
gcctacttgcccccagaggagcggatgactcaggactgccctcagcccatggacaccaac
ctgatggtccccgcgttgcccctggagatcagcaacaggccagatgttcagccggtggcc
tacgaggaacctaaacactggtgctctatagtgtactacgagttgaacaaccgggtgggc
gaggcattccaggccaactctaccagcgtcctggtcgacggcttcaccgacccgtccaac
aaccgcaaccgtttctgcctgggcctcctctccaacgtcaaccgcaactcaaccatagag
aacacccggcgacacattggcaaaggagtccacctgtactatgtgggaggtgaagtgtat
gctgaatgtctgagtgacagcagcatcttcgtccagagtcggaactgtaactaccaccat
ggcttccaccccaccaccgtctgtaagatccccagcggctgcagcctcaagatctttaac
aaccaggagtttgctgagctgctggcccagtccgtcaaccacgggtttgaggctgtctac
gagctgaccaagatgtgcaccatccgcatgagcttcgtcaagggctggggtgcagagtac
caccgccaggacgtgaccagcaccccctgctggattgagatccacctgcacggtcctctg
cagtggctggacaaggtgctaacccagatgggctccccccacaaccccatctcctctgtg
tcctag
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