Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419027
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Entry
139419027 CDS
T10872
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
139419027
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
139419027
RSF complex
139419027
WICH complex
139419027
B-WICH complex
139419027
NORC complex
139419027
BRF complex
139419027
NuRF complex (fruit fly)
139419027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139419027
NCBI-ProteinID:
XP_071024961
LinkDB
All DBs
Position
10:complement(67159289..67170278)
Genome browser
AA seq
1031 aa
AA seq
DB search
MSETGNGVELRKEQAVELEETGGEEKDDASEASKEESSEAGQDAQDEDPSSSTAPAYEEK
VASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNRH
RRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGIL
ADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGD
REQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEI
VREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVER
LHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMDK
MRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRVL
IFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEENSPKFIFMLSTRAGG
LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEM
KLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGEK
KTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYAV
DAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNP
ELPNSAQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDD
IENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTK
IGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQFR
FDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGEGTPD
PRGGRRKKLKL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcggaaagagcaagcagttgaacttgaagaa
accggaggggaggaaaaggatgatgcgtcagaggcaagcaaggaggagtcttctgaagcc
ggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggagaaa
gtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgtttgcc
catttcattcaacctgcggcccagaagacccccacctccccgctcaagatgaagccagga
cgccctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgtcat
cgtcgcacagaacaggaagaggatgaagagctgctgagcgaaagcagcaagaccaccaac
gtctgcacccgctttgacgaatctccctcctttgtaaaagggggtacaatgagagactac
caggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaacgggatcctt
gctgatgaaatgggtttgggtaagaccctgcagaccatctctctgctggggtacatgaag
cactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtacaac
tggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcggagac
cgagagcagaggaatgccctgatcagagatgtgctgctgccaggggagtgggatgtgtgt
gtcacctcttacgagatgctcatcatagagaaggccgtgttcaagaagtttaactggagg
tacctggtcatcgacgaggcccacaggatcaagaacgagaagtcaaagctgtcagagata
gtgcgtgaattcaagaccaccaaccgtctgctgctaaccggcaccccgctgcagaacaac
ctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctcagag
gactttgactcatggtttgacaccaacaactgcctgggggatcagaagttggtggaacgt
cttcacactgtactgcgtcctttcctgctgcgtcgtatcaagaatgaggtggagaagtct
ctgctgcctaagaaagagatcaagatgtacgtagggctgagtaagatgcagagagaatgg
tacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggacaag
atgcgcctgctcaacgtcttgatgcagctgaggaagtgctgcaaccacccgtacctgttt
gacggggccgagcccggcccgccttacaccaccgacctgcacctggccgtcaacagcggc
aagatggccgtccttgacaagctgctgcccaagatgaaggctcagggctcccgtgtgctg
atcttcagccagatgaccaggatgctggacatcttggaggactactgcatgtggcgcaac
ttcggctactgtcgcctggacggacagacgccccacgaagagagacagatctccatcaac
gcgtacaatgaggagaacagccctaagttcatcttcatgttgagcaccagggccggaggg
ctgggtattaacctggccacagctgacgtggtcatcctctacgactcagactggaaccct
caggtcgacctacaggccatggaccgagctcacaggattggtcaaaagaagcaggtgcgc
gtgttccgtttcatcacggaaaacacagtagaggagaggatcgtggagcgggccgagatg
aagctccaactggactccattgtcatccagcaaggaaggctagtggatcccaacgccaac
aagctggggaaggacgagatgctgtctatcatccggcacggcgccacgcacgtcttcgcc
tccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgagaag
aagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaacttc
accatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagggagaagaag
aaggtggtcaccaactggatcgagccacccaagagagagaggaaggccaactacgcagtg
gatgcctacttcagagaggccctgcgtgtcagcgagcccaaagcacccaaggctcctcgt
ccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaactg
ctggagaaagagatcctattctacaggaagactatcggctacaaggttcctcgtaaccca
gaactgcccaactcggctcagcaccagaaggaggagcaggccaagattgatgaggccgag
ggcctatcagaggaggagctggaggagaaggagaacctcctctcgcagggcttcaccatc
tggaataagcgtgactttaaccagttcatcaaagccaatgagaagtgggggagagacgac
atcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcatggaatattcc
gctgtgttctgggagcgctgcaacgagctgcaggacattgagaagatcatggctcagatc
gagaggggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacacaaag
attggtcgctacaaggcgccgttccaccagttgaggatctcgtacggcaccaacaagggg
aagaactacacggaggaggaggaccgcttcctcatttgcatgctgcacaagttgggcttc
gaaaaggagtcggtctatgacgagctgcgccagtgcatccgcaactcgccccagtttcgc
ttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacaccctg
atcaccctgattgaacgagagaacatggagctggaggagagggagaaggcggagaagaag
aagaaaggaccacggagtcagtcttctgctcagaagcgtaagggagaagggaccccagac
ccgcgaggaggccgcaggaaaaagctaaagctgtga
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