Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419068
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Entry
139419068 CDS
T10872
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04520
Adherens junction
ocla04916
Melanogenesis
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139419068
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139419068
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139419068
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139419068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139419068
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
139419068
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139419068
NCBI-ProteinID:
XP_071025071
LinkDB
All DBs
Position
10:69064583..69123143
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AA seq
400 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDQEQIFAELSHSEEDEGDLADIKSSLVNESET
SPNSNHDGTRQSQISQDSYHEKHRDHHDDGKHLDMYNKGHPYSGYPGYIMMTNMNNDSYM
NNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQDVNPKQGQYH
SSCLSTGMQRHHPGPDMTNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIV
NPQVKHEPQHDNDLMHIFARKPQHQDQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAEC
TLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRE
KIQEPAADPHRTPFDPSALTRVGFQNHHAGTGQRMKTAYI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccacaactagcaggtggtggtggtggcggggaccctgagctttgtgccaccgacgaa
atgattccgttcaaggatgagggagaccaagaacaaatattcgcagaactcagtcactca
gaggaagacgagggagacttggcagatatcaagtcatctttagtaaatgagtcagagacg
agtccaaacagcaatcatgatggaactagacaatcccaaatatcccaagactcatatcat
gaaaaacacagagaccatcacgacgatgggaaacacctagacatgtacaacaaaggtcac
ccgtactctggatacccaggttacatcatgatgactaatatgaacaacgactcctacatg
aacaacggctccctgtcgccgcccatgcccagaacgtccaataaggttccggtggtacag
ccgtcccatgcggtccatccgctcacccccctcatcacctacagcgacgaacatttcgcc
cccggaccccactccggacaccacccccaggacgtcaaccccaaacaaggacagtaccac
tcatcctgtctctctacaggcatgcagcggcatcaccccgggccagacatgaccaacttc
taccccctctcccctggaggagtgggacagatcacgcccccactgggatggttctcccac
cacatggtccccggtccccccggcccccacgccacagggatcccccacccggccatcgtc
aacccccaggtcaaacacgagccccagcacgacaacgacctgatgcacatttttgccagg
aagcctcagcaccaggatcagaggaaggagcaggagcccaagagaccccacatcaagaag
ccgctgaatgccttcatgctgtacatgaaggagatgagggccaacgtggtggcagagtgc
acgctcaaggagagcgccgccatcaaccagatcctgggacggaggtggcatgctttatcc
agagaagagcaagctaagtattacgaattagcccgcaaggaacggcagctccacatgcag
ctctacccaggctggtccgccagagataattatggaaagaagaagaagcggaagagggag
aagatacaggaaccggctgcagacccccatagaactccattcgacccctccgccctcact
agagtgggctttcagaaccaccatgcaggtacaggccagagaatgaaaacggcgtacatc
tga
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