Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419145
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Entry
139419145 CDS
T10872
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139419145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139419145
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
139419145
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
139419145
NCBI-ProteinID:
XP_071025210
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Position
10:75845668..75869116
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AA seq
549 aa
AA seq
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MVLNIPGVVAMAVFYLLVLGTGLWAARKSRAMEKKSTGDKTEITLLGDRNIGLLVGIFTM
TATWVGGGFIVGIAEVVYNPNLGLVWAFMPLQSSVSFIIGGIFFAKPMREKKYVTMMDPF
QIKYGRVVSGALVFPALVMDALWVACTLVGLGGTMSVILDLPYSYSVGISAVVAIIYTLL
GGLYSVAYTDVIQLILIFFSLWLCVPFLMANPVVGDITQTAFNHTYQAPWLGHMEKGKVF
KWVDDFLLVALGSLSFQCFHQRTLSASSSFNAQVTCFAAAAMVLILGIPSVLVGAVAAST
DWNLTSYGSPSPYERNETGLVLPIALQHLAPPYVSVIGIGAIAAAVMSSVDSGLLSSASM
FSSNIYKNIIRKQASDREIQWVIRVSVVVVGLCGMALTLLHNSTYALWILASDLSYTIIF
PQLICVLFFQVSNGYGAVVGYLVGGLMRLLCGEPIFNLAPVLHFPGCTLEDGVYVQRSPI
RTICMLLALAAILGFSWLAQLMFNKVWLPERWDVFQVKFQTLPLGGAREMKEKEEDGAVS
EPMLDTTKC
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaacattccaggtgtggttgccatggcagtgttctatctgctggtcctgggg
acaggtttgtgggcagcacggaagtccagggctatggagaagaaaagtacgggagacaag
acagagataaccttactgggagacaggaatatcggcctgcttgtgggaatattcaccatg
actgctacgtgggttggaggaggctttatcgtagggatagcagaggttgtctataaccct
aacctgggtctggtctgggctttcatgcccctacagagctccgtctccttcatcatcggt
ggtatattctttgccaagccgatgagggagaagaagtatgttactatgatggatcccttc
cagatcaagtatgggagagtagtgagtggagctctggtgttccctgcccttgtaatggat
gcactgtgggtcgcctgcacactcgtcggactaggtggcaccatgagtgtaattttggac
ctgccctactcctactctgttgggatttctgcagtggtggccatcatctacactctactg
ggaggactctactctgtagcctacaccgatgtcatccagctcatcctcatcttcttcagt
ctgtggctgtgtgtcccgttcctcatggccaacccagtggtgggtgacatcacccagaca
gccttcaaccacacctaccaggccccctggctgggacacatggagaaggggaaggtcttc
aagtgggttgatgacttcttattggtggcgttgggtagcttgtctttccagtgtttccac
cagaggacgctttctgcctcttcctcgtttaacgcccaggtcacctgcttcgcggctgct
gccatggtcctcatcctggggatcccctctgtcctggtcggggctgtagccgcttccaca
gactggaacctgacatcgtacgggtctccgtctccgtatgagcgcaacgagacgggattg
gtgctccccatcgccctgcagcacctggctccgccctacgtgtctgtcatcggcatcggg
gccatcgccgccgcagtgatgtcatccgtggactctggcctgctcagctccgcctccatg
ttctcctccaacatctacaagaacatcattcggaagcaggcctcagacagggagatacag
tgggtgatccgtgtgtcggtggtggtggtggggctgtgtgggatggccctcactctcctc
cacaacagtacctatgccctgtggatcctggcgtctgatctctcctacaccatcatcttc
cctcagctcatctgcgtcctcttcttccaggtctccaacggctatggagccgtggtggga
tacctcgtagggggcctgatgagactcctctgtggggagcccatcttcaacctcgcccct
gtcctccacttccctggatgcaccctggaggacggcgtctacgtccagcgctcccccatc
aggaccatatgtatgcttctggccctggcggccatcttgggtttctcctggctggctcag
ctgatgttcaataaggtctggttgcccgagaggtgggatgtgttccaggtaaagttccag
actttgccacttggtggcgccagagagatgaaagagaaggaggaggatggtgcagtctct
gagccaatgcttgacaccacaaagtgttaa
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