Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419165
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Entry
139419165 CDS
T10872
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139419165
04090 CD molecules [BR:
ocla04090
]
139419165
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139419165
CD molecules [BR:
ocla04090
]
Proteins
139419165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Mucin
LRR_TTSS
Motif
Other DBs
NCBI-GeneID:
139419165
NCBI-ProteinID:
XP_071025248
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Position
10:complement(77818050..77876847)
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AA seq
871 aa
AA seq
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MLWRAGLVLLLCWGSTGELRHQPRDSPEREDPTSKLQADSASVSTRQQRSPPPVEPLDFG
FVPSGVYDTHAYYEPGAIGVLFHMVHAFLYVVQPNPFPKDLIVKVIQQNMGGIKLEDYRK
PENVVLMLQTIYYEAGFLLCVSLGCVFLVLTPVVGLCFCVCRCCENCGGEMHQRQGKNPD
CQRGFYTAALITTSIFITTGVLIAHAANHNITSQIKSTRRFISTNMRDLKTFANNTPAQI
DHLTAQYTTAKNKVLSDLDNIGPLLGGRIQTQLEKEVVPSLDTALRMAGGKVENAVKALR
ESKEALESVSSSLDVLHEGTSRLALRLTYERTSLSNTLSDPACTNGAVSRTCNNIRITLP
QLGINSNFSGLPDVSPQLASLEIALKTDLSNILQKGYSSFNDTPRLVQQQTKNVVAGVKA
MLDKIGVEIIGFSKMFPVEASLANFTIFLSQGQKNMEAYYPQIDQMDFYRWIGCVAVLCS
VVLVLTFNFLGLLCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFAWVLMGLVSAG
FVVGGNIEKLFCEPLANRQLFKIIDTPYMVHPAKKNFLPGMLFQNPNINLTVGSMYRDCY
DNNGLYHALQLETMFNINTFLKTTVFNKDLVKVFDSVSIDLQSIVLLEQDGRDNLLTFSN
AGIGDINYAAYLAEVNKGVTLVDLLSFSNELEAQADLLPRGALENALKGHASSIRQIHRE
QVVPMEQAMSTLSQSIRLLQRTAKELPVKVTNVLSAIDEAEYLITHNASRVVKQERDVYM
QSLVGYFRQYTDWVKNSLTGEVSQCKPISNIIDSMEIVACSFIVDSVNTFWFGLGGCCVF
LVPSIILSVKLAKYYRRMDTEDVFEEGQENW
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggagagcggggctcgtgttgctgctgtgttggggcagcaccggggagctacgt
catcaaccccgggactccccggaacgtgaagacccgacgagcaaactgcaggcagactcc
gcgtccgtgagcacgcggcagcagcggtccccgcccccggtagaacccctagactttggg
ttcgtgccctccggtgtgtacgacacgcacgcctactacgagcccggtgccatcggtgtt
ctgttccacatggtgcacgcgttcctttacgtggtccaaccgaaccccttcccgaaagat
ctcattgtaaaagtcatccaacagaacatgggagggataaaactggaagactatcgcaag
ccagagaacgttgtcttaatgctacagacgatctactatgaggcgggcttcctgttgtgt
gtgagtctgggctgtgtattcctggtgttgacccccgtggtaggactgtgtttctgtgtg
tgtcgctgctgtgagaactgtggaggggagatgcaccagagacaggggaagaacccagac
tgtcagagaggattctacacggccgctctcatcaccacctccatattcatcacgactggg
gtgctgatagcgcatgctgccaaccacaacatcacgtctcagatcaagtcaacacgccgt
ttcatcagcaccaacatgagagacctgaagaccttcgctaacaacacaccggcgcaaatt
gaccatctgacggcccagtacactacagctaagaataaagtcctgtctgacctggacaac
atcgggcctctgttgggtgggaggatccagactcagctggagaaggaggtagttccttct
ctggacacagctctgcgcatggctggaggcaaagtggagaacgccgttaaagctctgcgt
gagtctaaggaggcgttggagagtgttagttcttcgttggatgttcttcatgagggaacc
tctcgtctggcgctccgtctgacgtatgaacggacctccctgtccaacaccctgtctgat
ccggcctgcactaacggagctgtgtcacgcacctgcaacaacatccgcattacactccca
cagctgggaatcaacagcaacttctctgggttaccagacgtcagtccccagttggccagt
ttagagattgccctgaagacagacctcagcaacattttacagaagggttattcatccttc
aatgacacccccagactggtccaacagcagactaagaatgtagtagcaggagtgaaggcc
atgctggataaaataggagtagagattataggtttctctaagatgttcccagtggaagca
tctctggccaacttcaccatcttcctgagtcagggccagaagaacatggaggcctattac
cctcagatagaccagatggacttctacaggtggataggctgtgtggccgtgctgtgttca
gtggttctggttttgacctttaacttcctgggtctgttgtgtggaacgtgtggctacgac
aaacaggccacgcccaccacccgcggctgcctatcaaacaccggaggcaacctgctaatg
gcaggtgtagggttcagcttcatctttgcctgggtattgatggggctggtatcagcaggg
tttgttgtcgggggcaacattgagaagctgttctgtgaaccgcttgctaacagacaactg
ttcaagatcatagacactccctatatggtccatcctgccaagaagaacttcctgcctggc
atgctgttccagaaccctaacatcaacctgactgtaggaagcatgtaccgagactgctat
gataacaacgggctgtaccatgctctgcagctggaaacaatgttcaacatcaacaccttc
ctcaaaacaaccgtgtttaacaaggacctggtgaaggtgtttgacagcgtgagcatcgac
ctccagagcattgtgttattggagcaggatggacgggataacctgctaaccttctctaac
gctgggataggagatattaactatgctgcttacctagcagaggtgaataaaggtgtaact
ctggtggatctgctgtcattttccaacgagctggaggcccaggcagaccttctgccgcgg
ggagctctagagaatgctttgaagggtcatgccagcagcatacgacagatccacagagaa
caggtcgtccctatggagcaggccatgagcaccctcagccagagcatccggctactgcag
aggacagctaaggaactacctgtgaaggtgactaacgtccttagtgccatcgacgaagca
gagtacctcatcacacacaacgcttcacgcgtggttaaacaggagagagatgtgtacatg
cagagcctggttggatacttcagacagtacacagactgggtcaaaaactctctgacaggg
gaggtgtctcagtgtaagcccatcagtaacatcattgactccatggagatcgttgcctgc
agcttcatagtcgactcagtgaacacgttctggttcggtctgggtggttgctgtgtgttc
ctggttcccagcatcatcctgtcagtcaaactggccaagtactacaggaggatggatacg
gaggatgtgtttgaagagggccaagaaaactggtag
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