Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419287
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Entry
139419287 CDS
T10872
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139419287
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139419287
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
MDH
Motif
Other DBs
NCBI-GeneID:
139419287
NCBI-ProteinID:
XP_071025367
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All DBs
Position
1:9239671..9248158
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AA seq
881 aa
AA seq
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MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQ
VASKFMPVSSLIIGVDLVPIKSIPNVVALTEDITTEKCRQALRKELQTWKVDVVLNDGAP
NVGANWVHDAFSQAHLTLMALKLACDFLAKGGTFVTKVFRSKDYQPLLWIFQQFFKKVQA
TKPQASRNESAEIFVICQGYLAPDKIDNKFFDPKHAFKEVEVQAKAIKDLVPLKKPKAEG
YTDGDLTLYHTFSATAFLKADNPVDFLSKANEINFDNPELESHEATSDEVIECCRDIKVL
GRKELRLLLNWRSKLRRYLAKKLKDEAKQLDEDIKLSSGEEASDAEEKKEEKKEEKEKKK
MTVSEKKEEEAELEEEEMEQKLAELKAEEVAELRRKKKKLLKERRKQRERVALKMDLPGV
SIADGNDSSMFSLVTINKAAALCEITKGDMKLADAMVEGEEDLYFSDDGDSDEVSLVSDL
DDDDLDEIIEKQKEMAKDKATKKKVSFNVEKEEEEEEEGSGLIVELEGKEEKRDRETSMW
FSKDIFAELDLDGDAASELRQTQMLQNKDPTAKGKKRKTPEEPDTAQPEGEEAGPSQEAG
AEGDSDSYSDDDNSSDEDDEKSIAQMKAKGSGGIQGDEDGDDFQVVPVESTSKRARIMNA
EGLALGCQIATSKKRSRDLVDGSFHRFASSEDQCEVPEWFVDDEKKHRNKPIPVTKEMVE
EYKAKWKEINARPIKRVAEAKARKKRRMLKKMESAKKKAEAVVNTVDIGEREKMAQLKSI
YKKAGLGKEKREVTYVVAKKGSGTKRVRRPGGVKGQFKVVDGRMKKDMRGMQRKEQRERG
GKKGGKGKGGGGKGKGRGGGGGGFKGGRGGMKGGKGRPGRK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaactcaaagttggaaagaccagaaaagataaattctaccacttagcaaag
gaaacgggatatcgttcacgttcttccttcaagcttattcaactgaaccgaaaattccag
ttcttacagaaagccagggctctggtggacttgtgcgctgctccgggtggttggttacag
gtggcgtccaagtttatgcctgtctccagtcttattattggtgtcgacttggtcccaatc
aaatctatccccaacgtggtcgccctgacagaggacatcaccacagagaaatgccggcag
gctctgaggaaggagctccagacatggaaggtggacgtggtcttaaacgatggagctcca
aatgttggagccaactgggtgcatgatgccttctctcaggctcatctgaccctgatggct
ctgaagctggcgtgtgacttcctggccaaagggggcacgtttgtcaccaaggtgttccgc
tccaaagactaccagccactgctgtggatcttccagcagttcttcaagaaggtgcaggct
accaagccccaggcctccagaaacgagtcggctgagatcttcgtcatctgccaaggctac
ctggccccagacaaaattgacaacaagttcttcgaccccaaacatgctttcaaagaggtg
gaggtccaagccaaggctatcaaagacctggtccctctgaagaaaccaaaggcggaggga
tacacagatggtgatctgaccctgtatcacaccttctcagcgaccgccttcctcaaggct
gacaaccctgtggacttcctgagcaaagccaacgagatcaattttgacaaccctgagttg
gagtctcacgaggccacctctgacgaggtcatagagtgttgccgtgacatcaaggttctg
ggccgcaaggagctccgtctgctgctgaactggaggtccaagctgaggagatacctggct
aagaagctaaaggatgaggccaagcagctggatgaggacatcaaactgagttcaggtgag
gaggcgagcgacgcagaggagaagaaagaagagaagaaagaggagaaggagaaaaagaaa
atgacggtgtctgaaaagaaggaagaagaggccgagttggaggaggaagagatggagcag
aaacttgccgagctgaaagccgaggaggtggcagagctgagacggaagaagaagaagctt
ctgaaggagaggaggaagcagagggagagggtggcactgaagatggacctgccgggagtc
tccatcgcagatggcaacgactcctcaatgttctccctcgtcaccattaacaaggccgcg
gctctgtgtgagatcaccaagggggacatgaagttagctgatgccatggtggaaggagag
gaggacctatacttctctgacgacggtgacagtgacgaggtctccctggtctctgacctg
gacgatgacgacttggatgagatcatagagaaacagaaggagatggccaaggacaaggcc
accaagaaaaaagtgtccttcaatgtggagaaggaggaggaggaggaggaagaagggagt
ggactgatagtggagctggagggaaaggaggagaagagagaccgtgagaccagcatgtgg
ttcagcaaggacatcttcgctgaactggatctggacggagatgcagcgagcgagctgcgg
cagacacagatgctacagaacaaggaccctacagccaaggggaagaagaggaaaacccca
gaggagcctgatacggcccagcccgagggggaagaggcggggccttcacaggaagctggg
gcagagggggatagcgacagctactctgatgatgacaacagcagtgacgaggacgatgag
aagagtatcgctcagatgaaggctaaagggtctggcggtatccaaggagacgaagacggc
gacgacttccaggtggtgccagtggagagcaccagcaagcgtgctcgtatcatgaatgca
gagggtttggccctgggctgtcagatcgcgacctccaagaagagatcaagggacctggtt
gacggctctttccacaggtttgccagctcggaggaccagtgcgaggtgcccgagtggttc
gtggatgacgagaagaaacacaggaataagcctatccccgtcaccaaggagatggtggag
gagtacaaggcaaaatggaaggagatcaacgccaggcccattaaaagagtggctgaggcc
aaggccagaaagaagaggaggatgctgaagaagatggagtcagccaagaagaaggcggag
gccgtggtcaacacagtggacattggtgaaagggagaagatggcccagctaaagagtatc
tataagaaggcgggccttggtaaggagaagagggaggtcacgtacgtcgtggccaagaag
ggctctggtaccaagagggttcgtcgtccgggcggtgtcaagggccagttcaaagtggtg
gacggccgcatgaagaaggacatgagaggcatgcagaggaaagagcagcgcgagagaggg
ggcaagaaaggagggaaggggaaaggaggggggggcaaaggaaaaggcagaggtggtgga
ggaggaggatttaagggtggaagaggagggatgaagggtggaaaaggacgtcctggcagg
aaatga
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