Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419337
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Entry
139419337 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139419337
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
FERM domain-containing proteins
139419337
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Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
PDZ_2
FERM_f0
RA_3
Motif
Other DBs
NCBI-GeneID:
139419337
NCBI-ProteinID:
XP_071025379
LinkDB
All DBs
Position
10:72482063..72567204
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AA seq
2223 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRDSSSRERILVDGKAAAGGESSGQDQKNSYPV
RLTVQILRDPLLNTHGITLTPQTPILVQDITPAGPADGRLVPGDQVVKINNVAVDDLTPE
QAADLIRECQHSVMITVLRNSAGPKSSFITPEKRAKLRSNPVKVRFAEEVEVNSHSQGNS
LLFLPNVLKVYLENGQTKAFKFEPNTTVKDIVMTLKEKLSLSRIEHFSLVLEQKYSISKL
LLLHEEERIQQVVHQKEVHDYRCLFRVCFIPREPEHLLQDDPTAFQYLYLQGINDVLQER
FAVEMRCNTALRLAALHIQERLASCGQSPRTKLKIITKSWGIENFISSTLLRNMREKDLR
KAIGYHMKKSQSQEPKQKVLSANQAKINYLEELCDLKSFGGKSFSATMMLQDRESMVTLL
VGSRYGISQVVNHKLSIMTTLTEFSSITRIELLPESDRVSLVKIYLQDIKPITLLLESIA
AKELSCLVAGYCRALVDPSLIIFPWTQDGKQHRVSAEEGYVSRGGSDSDDSSDMDMDTLI
SLVSHNNKRTTSDPVGLRRIMEERKEERKERKEREERKKNEKGEGEQEKNMKYGTMSPLR
KNRKKERIEEKVGGVGDQREKDTNAGGEVNSGKQRGAENGGMQKDDREREDESTKKEREG
KKRKGERKGEEEREGGEVREAMTEEHRSVSEEASDSCRTDSRFMTSISSDSLDALEEDDL
IACSSSLPHPHPPFRLTVEPPHPQPHPREGASSPQGGAGEWRGEGGGGGSGDRRGVGGEW
RGGVGGECRGGVEGEWRGGGGECRGGGGECRGGGRGRRSGNGAWVNSHHSPMTPDSMNSE
PVTPVVDPSENLNYAELSLMLEYLPSPPEASDDEDEEEKREERRRSNEGTGQEVFSVSGC
PRSSSSSLMDCVFTFEQSDARHYYNICPNVTPDSTRSLTHPHHETEEEEGGGEEEEQGGL
LTLEPVPILQPPPGFGDSSSDEEFFDARDRIASPEDPTSGTVSRDFSAEMTSGMTQQTVS
LSDIRISLAEGTRHEREEEGREGETSEGGGGRDMCSRLSRKRSKKRRSFMQTDFTSTVSY
PGPDENQERNRNPDHVPDQYRDRAQNRRESSDESQQLSLDPEPSEQSQNPCPTVSSLSHA
EGEASQLESKPILAKPSPEGSHRGPGEPCVLGNPKGNPRAPDNPKGDLHRSSRNRRQSME
TEPDMMESKSVTALVTAASLSITAVRCRVEPDGKESPDRRGDGEEVEGEMEEEEGGGEAG
AGPFTCHMFLTEIKEEEGQRGEETGEEGESDREERQPSLISEGPPSVRGSQFSRRPLCLT
KDEDQEASFVPQISISHPGVYGRDTGGEQGVAGGEESVTPLSAPPPPTSPLPPFPAPSIP
HTERGERDSKDGNVWSQPKLFTLSDREKDISYLTQVHRKLAISHQDLTSQRKAEIDNDEA
IDSTNSVTDNTDVATANIAATGNINSVMANTETTVDSDLAIANHKDTNSIKSVPANTIAY
ADFAMTNNEANAIINSLTTSNDSTSNANLAMTNANSANANSAMANIPKESPISPTTGFLL
RPCSPGIIGQSLSASTLRGKIQSLPLYLSRSQETLTLSGVGSPNRSPSPETTSNKTEVMV
TTETTKYDDVTKVATGEDLKDSGVALVESDDSEVTLTESEVGEVVVETAGAEITRLTVSE
VKEVIEKVVMVYGSSLPPPLAPISLESKPDPKMVVKLPTCPIATVETAPPMAPAPICLEP
KPVPELLSPGSTIHKMAAPLPSCPSFPVPIRVEPKPDHEPLSIRSKMAALSSSYPPALVV
TTESLNSSSSNPHPIRVEPKPEPCPEPHSGPKMSAPLSSCPSALVVTTQSLNGPGLSFPG
SNMRGQPFGSNSFCRPPGEEAGLLNTLTTGCGVFTSTCETQPNQAHMESYSQAKPDFGCS
SVLASGCETVLDGVQTPLEACRCPPPLVYTNCFSGGDSFDDELTVYEFSCRTSSPPASQP
SSSALALPLTTSPPLSSFLSSSPPSSLLSPSFPRSVLPPSSSMELSPLLSPLLSPSNCFL
SQSSLHDDISRLRHRRFPPPPAGFQTIRSDVDELLTLLQGEDGEXRGGRHPRETCATHFS
ENKRLLHGEARRLMAGCQKVVRVGQTPDEMLFSLSDSFRTLVGMAGMCLWFSGCDRCDRR
NAEALAGLADVARTYREFVLAAERASGRRSCHDLSTKLLAKQCTALTASVFCLTQLFRTL
TAL
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggacagaagccgctccccgtcccgcaggaccagtcgggtggagcaggtg
gtggggcgatggctacgacgctccagggattccagcagcagagagcgtatcctggtagat
gggaaggcggctgcggggggagagtctagcggtcaggatcagaagaacagctacccggtt
agactgaccgtccagatcctacgagaccccctcctcaacactcatggaatcaccctgaca
cctcagacacccatactggtgcaggacatcaccccagcggggccggctgatggaaggctc
gtccctggcgaccaggtcgtaaagattaacaatgttgccgtcgacgacctgaccccagag
caagcggctgacctcatcagggagtgtcagcactctgtgatgataacggtcctcagaaac
tcagcgggacccaagtcttccttcatcaccccagaaaagagagctaaactccggtccaac
ccggtcaaagttcgctttgctgaggaggttgaggtcaatagtcactctcagggcaactcg
ctgctcttcctccccaacgttctaaaggtgtatctggagaacggacagaccaaggccttc
aagtttgaacccaacaccactgtcaaggacatagtgatgaccctgaaggagaaactgtct
ctgtctcgtattgaacacttctctttggttctggaacagaagtatagcatcagtaaactg
ttgttgctacatgaagaggagaggatacaacaggtggttcatcagaaggaagtccatgac
tacagatgtctgttcagagtgtgttttatacccagagaacctgagcacctgttacaagac
gaccccactgccttccagtacctctacctgcagggtataaatgacgtgctacaggagcgt
tttgcagtggagatgcgatgcaacacggccctgcgtctggcagccctgcacatacaggag
agactagccagctgtggacagtcacctcggaccaaactcaagatcatcacgaagagttgg
ggcattgagaactttatctcttcaaccctcctgaggaacatgagggaaaaggatctgaga
aaggccattggctatcacatgaagaagagccaatcacaggagccaaagcagaaggtgctg
tcggccaatcaggcgaagattaactacctggaggagctatgtgacctcaagtcctttggc
gggaagtctttcagcgccaccatgatgctccaagacagagagtcgatggtgaccctgttg
gtggggtcgcggtacggtatcagtcaggtggtgaaccacaaactgagcatcatgaccacc
ctcacagagttcagcagtatcacacgcatagagctgctaccagagtctgaccgcgtcagt
ctggtcaagatatatctacaggacatcaagccgatcaccctgttgttggagtcaatagca
gctaaggaactgtcctgtctggtggcagggtactgtcgtgccctagtggaccccagcctc
atcatcttcccctggacacaggacggcaagcagcaccgcgtgtctgctgaggagggttat
gtgtcgcggggtggcagtgactcggacgattcctccgacatggatatggacactctcatc
tcccttgtatcccataacaacaagcgaaccacatcagacccggtcggtctacgccggatt
atggaggagaggaaagaggagaggaaagagaggaaggagagagaggagaggaaaaagaat
gagaagggagaaggagaacaagagaaaaatatgaaatacggaactatgtctccactgaga
aaaaacagaaagaaggagagaattgaggagaaggtggggggagttggggaccagagagag
aaagacacaaacgcaggaggagaggtgaactctgggaaacaacgaggagcagagaacgga
ggaatgcagaaagacgacagagaaagagaggatgagagcacaaagaaggaaagagaagga
aagaagaggaaaggggagaggaaaggagaggaggagagggaaggaggggaggttcgggaa
gctatgacagaagagcaccggtccgtatcagaggaggcgtcagactcgtgtcgtactgat
tctcgtttcatgaccagcatctccagtgactccctggatgctctggaggaagatgacctg
atcgcctgctcttcctccctccctcaccctcaccctcccttccgcctcacagtggagccc
cctcatccccagcctcacccacgagagggtgcatcctcaccccaaggaggggcaggagag
tggagaggagaaggaggtggaggggggtcaggagataggagaggtgtaggaggagagtgg
agaggaggtgtaggaggagagtgtagaggaggggtagaaggagagtggagaggaggggga
ggagagtgcagaggagggggaggagagtgcagaggagggggaagagggaggagatcgggc
aacggagcttgggtcaactctcaccattctcccatgacccctgactctatgaactctgaa
cctgtgacccccgttgttgacccctctgagaacctgaactacgctgagctctctctcatg
ctggagtacctccccagtcctccggaggcgagtgacgatgaggatgaggaggagaagagg
gaagagaggaggaggagtaatgaaggaactggacaggaggtattttctgtatccggatgt
ccccgttcctcctcctcctcacttatggactgtgtgtttaccttcgagcagagcgacgcg
aggcattactacaatatctgccctaatgttacccccgacagcacccgcagcctcacccac
cctcaccatgagactgaggaagaggaaggtggtggtgaggaggaagagcagggggggctc
ctaaccttggagcccgtgcccatcctccagccgcctccagggttcggagacagcagttct
gatgaggaattctttgatgcgagggatcggatcgcctcgcctgaagacccaacatcaggg
actgtgtccagagatttttcagccgagatgacgagtggaatgacgcagcaaactgtgagc
ctgagtgacatcagaatcagcctggctgaaggaacgaggcatgaaagagaggaggagggt
agagagggcgagaccagcgaaggaggaggagggagagacatgtgctccaggctctctagg
aaaagatcgaagaaacggcgttccttcatgcagaccgacttcacctcaacagtctcctac
cctggaccggatgaaaaccaggagcggaacaggaacccagatcacgttcctgatcagtat
cgggaccgggcacagaaccggagagagagctcagacgaaagccagcagctgagtctggac
ccagaaccatctgagcagagccagaacccatgtcctactgtctcctctctgagccacgcc
gagggtgaggcatcccagctcgagtccaagcctatcctcgccaagcccagtccagagggg
tcccatcggggacctggagagccatgtgtgcttggtaacccaaagggaaatccacgggcg
cctgataacccgaagggtgacctccataggagctccaggaacaggcggcagtccatggag
acggagcccgacatgatggagtccaaatcggtcacggccctggtgacggcagcctccctc
tccatcacggctgtccgctgtagagtagaaccagacggcaaggagagccctgatcggaga
ggagacggggaggaggtggagggagagatggaggaagaggaggggggtggagaagcaggg
gcaggaccattcacatgtcacatgtttctaactgagattaaggaggaggaggggcagagg
ggggaggaaacaggggaggagggggagagcgacagagaggagagacagccctcgctcatt
tctgaaggaccaccctctgttagggggtcccaatttagtagacgacctctgtgtctcacg
aaagacgaggatcaggaagcctctttcgtaccccaaataagtatctcccatccaggtgtg
tatgggagggacacagggggtgaacaaggcgtggctggtggtgaggagagcgtgactccc
ctttctgctcctcctccccccacctctccactgccaccattcccagccccctccatcccc
cacacagagagaggagagagggatagcaaggatgggaatgtttggtctcaacccaaactt
ttcacactctcagacagagagaaggacattagctacttgactcaagtccatagaaaactc
gctatcagtcaccaagacctgacaagccaaaggaaagcagaaattgacaatgatgaagct
atagatagcactaattctgttactgataacactgatgttgctacggctaacattgcagct
acaggcaacattaattctgtcatggctaacactgagactacagttgactctgatttagcc
attgctaatcacaaagatacaaacagcatcaaatctgttccagctaacactatagcgtat
gccgattttgctatgactaacaatgaagctaatgctataattaattcccttacaactagc
aatgattctacaagtaatgctaacttagctatgactaatgctaattcagctaatgccaac
tcagctatggctaacattcccaaagagtctcccatatcacctacaacaggcttcctcctc
cggccttgctcaccgggcatcatcgggcaaagcctctcggcctccacattacgggggaag
atccagagcctgcccctctatttatctcgctcccaggaaaccctcaccctctctggggtg
ggaagccccaacaggagcccctctccggagaccaccagcaacaagactgaggtaatggtc
accaccgaaaccaccaagtacgacgatgtcacaaaggtggcaacaggggaggatttgaaa
gattccggggtggcgttggtagaatcggatgattctgaggttacgctgacagaatcggag
gttggcgaggttgttgtggagacggccggggcggaaatcacgaggttgacggtttcagag
gtcaaggaggtgatcgagaaggttgtgatggtctacggatcctcccttcctcccccttta
gcacccatctctctagagtccaaaccagatcccaaaatggttgtcaagttgcctacctgt
cccattgctacagtggaaactgcccctcctatggctccagcacctatctgtctggagccc
aaaccagtccctgaactactctccccaggctccactatccacaaaatggccgccccatta
ccttcctgtccttcctttcccgtgcccatacgcgtagagcccaaaccagaccatgaacca
ctatccatacgctccaaaatggccgccttgtcgtcttcttatccccctgctttagtggta
accacagagagtctgaattcctcttcttctaatcctcaccccatcagagtagaacccaag
ccagagccttgccctgaaccccattcaggccccaaaatgtctgctccgttgtcttcctgc
ccctctgctttagtggtgaccacacagagtctgaacggaccggggctcagcttccctggt
tctaacatgagaggacagccatttgggagcaacagcttctgtagacccccaggtgaggag
gcaggcctgctgaacactctgactacagggtgtggggtcttcacctccacctgtgagacc
cagcccaaccaggcccacatggaatcctattcgcaggcaaagcctgactttgggtgtagc
tcggtgctggcgtcagggtgcgagacggtcctggatggggtgcagacgcccctggaggca
tgcaggtgtccaccaccgctggtgtataccaactgtttcagcgggggtgacagcttcgac
gatgagttgacagtttacgagttctcctgccggacaagttctcctcccgcctcccaaccc
tcttcctctgcgctggccctccctctcacgacctctcctcctctctcctctttcctctcc
tcctcccctccctcctccctcctctctccctccttccctcgctccgtcctgcccccatcc
tcctccatggagctctcaccactcctctccccgctcctttccccgtccaactgcttcttg
tcccagtcaagtctccatgatgatatcagccgactacgccaccgccgcttcccaccgccc
cccgcagggttccagaccatccggagcgacgtggacgagcttctcaccctcctgcagggg
gaggatggggagnncagaggggggaggcaccccagggagacctgcgccacccacttctca
gagaacaagcgtcttctccacggggaggcccggaggctgatggctggctgtcagaaggtg
gtccgggtggggcagactccagacgagatgctcttctccctctccgacagcttcaggacc
ctggtgggcatggccggcatgtgcctatggttctctgggtgcgaccggtgcgaccggagg
aatgccgaggcactggcggggctggcggacgtggccagaacgtaccgggagtttgtgctg
gcggcggagagggcgagcgggaggcggagctgtcatgacctcagtaccaagctccttgcc
aagcagtgtaccgccctcactgcttctgtcttctgcctcacacagctgttccgcacactc
accgcgctctga
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