Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419356
Help
Entry
139419356 CDS
T10872
Name
(RefSeq) LIM domain only protein 7-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
139419356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139419356
NCBI-ProteinID:
XP_071025397
LinkDB
All DBs
Position
10:complement(77645241..77730313)
Genome browser
AA seq
1914 aa
AA seq
DB search
MASTGTEREEPHVPLDELRHPEPAFIEAQKWIEEVTGKSFGEKDFRSGLENGILLCELLC
SIRPGLVQKINRLPSPIAGLDNLSVFLRGCEELGLKGSQLFNPGDLQDTSIQANLRDSEC
SRKLKNVLITIFWLGKASSVCPSYDGPVLNLREFEGLRSHMRTLSEDRSGSDSVRPGVRD
SGYDCWDSERSQSLSPRQHTRDNSLDSLDSFGSRSQTSPSPDVIIHGNSDVDSDGDAPNR
KADVRRDDMLARRTSAGESRTFVPFNQFLPNRNVSAYVPTARRRSRPQDGEHGSLPQPIL
EEGGGGEGGGPFKRPPGPRSRNYKTVTWAPDGEEPKEEEWGLGQEEEVLKREVEEHRRLQ
RLEKAGIKVMPAVIRYGRPAPRLEQQEVKSPSPDIILRRHNDFLTNQKAAWDSDSEGEAE
GEEGGGGVRRVPDVRRDDLASRRAPRPPTAPRAYQYVPPPDCSLRDRELWEDIRRASHTA
LMDRMELETSAKEAVCDIITRRDNPFLSPASQREEEEEEEGRGVKVPLPNKTKDDLARRR
GHNRSRPSHRDGPMSFVHASITQSDLEKWERLKMSEPSESSPSPVCQACLEKGSGTPDII
SMATGSMRGCSKVVTFGGVTELEEQPISSSREGEESQLLRRLLAKATVAMPIIALGSQLS
EQQDSHMGGVDATHTPPPNPGPSPLSPESPPSLLELEARLAQYERRVREEEEDGGRDERK
VPDLQKDDMMARKTGAFPRTHNTTTTTLNRFLPLPGSKRPPQEVVTDRKIQQSRVSMDMP
QQHPNVAMVVRPPVPSHCNYDDDDEEEEECPVPDLEKDDMLARRTGAYQHSAGRTGRSFN
LFLPVPGAAQQKNTPSGGPNQLYKNTPAGGSNQLYKNTPAGGPNQLYKNTPSGGPNQLYQ
NTPSGGPNQLYQNTPSGGPNQLYKNTPSGGPNQLYQNTPAGGPNQLYRHKQQPSSGVSTA
TGTEAPTRKCLEDNPYLSSPSSPSTLLSSHTLTPPPTPPLPQLSGREKRREEGMERGKER
GKEREMERGKEREMERGEETEMEREKEREMERGEETEMEREERGKEIEKEIQMETEMKER
RKEIEIERGEETEMERGKKVGESKRRPFWVEDNDLPPMMLSRRVSKMSEELESISIINMH
SEEEGAGLLQPLGQSRYDGMQEQYTNHQEEEEWQDDLARWKSRRRSASQDLIRKEEERKR
MERMMKEEEGGHTQKKNIKTYREIVEDKERREAELCDAYRRAGSKAEAAMVLQRYALRFT
ISDSTLDSLQLPRTITTDQNPDSRTPATNQNPEFRTTTTNQNLESRTITTNQNPESKTIT
TDQNPESRTITTDQNPNPRTSINNQNSESTTITTDQNSESTTITTDQNPESRTITTDQNL
ESRTISTDQNPKSRTITSDQNPESRTITTDQNPNPRTIITNQNPESRTITADQNPESRTI
TPDQNPESRTIITDQNPESRSIITNQNPESRTITADYNPDSDPDNPERAGNGLEALQTDT
KQEPRAPPQKQISVTHTQHTQLQTQNTQHTQHTHTQNHSTQSQHTLPPPISPPPGPSLVD
GLVRVNGETLPSSPPSSALQSPSSPIHSPPPTEHPGANQKTQVSAVSALIGGRNCVVTTT
IVTELTQTHLQPRPLDMISNKQVNGSMALSRRSGEEAGSDSSLLSNQHTYSSSVTEGLEG
SSGTMESPMLNLAKRVDHWVWNPEDERRRQEKWQQEQERFLQEQYLREQDKLKGEWERAQ
REVDEEERRHNEEEKKILEETATALSHPPPTELAVQTEVIVPAQQIYASWDCESSRGQET
SLDRNQPCAVKRSGSYEGPQPPSSSPSSPQPPSPSRCVSGKRQCSGCNQALGKGTAMNID
TLGLYFHLTCFKCGVCKVQLGDTSSGTDVRIRNGLLSCHDCYATSHAVGQPTTL
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaccgggactgagcgcgaggaacctcacgttcccctggacgaactgagacat
ccggagcctgcattcatagaggcgcagaagtggatcgaggaggtgacgggaaaaagtttc
ggtgagaaggacttccggagcggcctggagaacgggatcctgctctgcgagttactgtgt
tccatcagaccaggtttggtccagaaaatcaacagactaccctcgcccatcgctggactg
gacaacctgtcagtgttcctcagaggctgtgaggagttgggtctgaaaggttcccagctg
tttaatccgggagaccttcaagacacctccatacaagcaaacctcagggactcagaatgc
agtagaaaactgaagaatgtattaattacaatattctggctggggaaggcatccagtgtg
tgtccctcctatgacggccctgtcctaaacctcagagagtttgagggactgcgatcacac
atgagaacgctgagtgaggacaggtctgggtcagacagtgtgaggccaggtgtgagggac
agtggttacgactgctgggactcagagcggagtcagtctctctctccccgacaacacaca
cgggacaactccctggacagcctggattcttttggctcgcgctcccagactagcccctcc
cccgatgtcatcatccatggcaacagtgatgttgactcagacggcgatgcccccaacagg
aaggcagatgtccgtcgtgatgacatgttagctcgtcgtacgtcggccggtgaatcacgg
acctttgttccctttaaccagttcctgcccaatcggaacgtctctgcctacgttcccacc
gccagacgcagatcacggccccaggatggagagcacggcagtctccctcagcccatctta
gaggagggaggagggggggaggggggaggtccctttaagagaccaccaggtccccgctcc
agaaactacaagacagtcacatgggccccagatggggaggagcctaaagaggaagagtgg
ggtcttgggcaggaagaggaagtgttgaaacgggaagtagaagaacatcggcggctgcag
aggctggagaaggcggggattaaagttatgcccgctgtgattcgctacggcagaccggcg
ccccgtctggagcagcaggaagttaagtcaccatcccctgacatcatcctgcgtcgccat
aatgacttcctgaccaaccagaaggctgcgtgggactctgactctgagggtgaggcagag
ggtgaagaggggggaggaggggtgaggagggttcctgacgtccgtagagatgacctggcc
tcccgacgcgccccacgaccccccactgctcccagagcgtaccagtacgtccccccacct
gactgcagtctacgggacagagaactctgggaggacatcagacgagcctcacacactgct
ctgatggacaggatggagctggagacaagtgcgaaagaggcagtgtgtgacatcatcaca
cgcagagacaaccccttccttagcccagcctcccagcgagaggaagaggaggaggaggag
ggtagaggtgttaaggtcccattacccaataagacgaaagatgacctcgctagaaggagg
ggccataataggtcacgcccatctcacagagacggaccaatgagcttcgtccatgcctcc
atcacccagtcagatctggagaaatgggagagactcaagatgtctgaacccagtgagtct
agcccctcccctgtgtgtcaggcatgtctggagaaaggttccggaacccctgacatcatc
tctatggcgacggggtcaatgcgaggttgttctaaggttgtgacctttggcggcgtgaca
gagctggaggaacagccaatcagctcttcccgggaaggggaggagtctcagttgttacgg
cgactgctggccaaggcaaccgttgccatgccgatcatcgcgctgggctcccagctctcc
gagcagcaggatagccatatgggcggagtcgacgccacacataccccgcctcccaaccct
ggcccctcccccctgagcccagagtctcctccctccctgttggagctagaagcccgtctg
gcgcagtacgagaggagagtgagagaggaggaggaggatggagggagagatgaaaggaag
gttccggaccttcagaaggatgacatgatggccaggaagacaggcgcgttccccaggacc
cacaacaccacgacaacaacattaaaccgcttcctaccactgccgggttccaaacgccca
ccacaggaagtagttacagacaggaagatacagcaatccagggtctccatggacatgcct
caacagcaccccaacgtggcaatggtcgtcaggccgcccgttcccagccattgtaactat
gatgatgatgatgaggaggaggaagagtgccctgtaccagacctggagaaggatgatatg
ttggctcgtaggaccggggcataccaacacagcgcggggagaactggacgctcctttaac
ctgttcctgcctgtccctggagcggcccaacagaagaacaccccctctggtggacccaac
caactctacaagaacacccctgctggtggatccaaccaactctacaagaacacccctgct
ggtggacccaaccaactctacaagaacaccccctctggtggacccaaccaactctaccag
aacaccccctctggtggacccaaccaactctaccagaacaccccctctggtggacccaac
caactctacaagaacaccccctctggtggacccaaccaactctaccagaacacccccgct
ggtggacccaaccaactctacagacacaaacagcaacccagcagtggcgtttccacagca
acaggaactgaagccccaaccaggaagtgtctcgaggacaacccctatctctcctccccc
tcttctccctccaccctactctcctcccacaccctcactcctcctcccacccctcctctc
ccccagcttagtgggagggaaaaaaggagggaggaggggatggagagagggaaggagaga
gggaaggagagagagatggagagagggaaagagagagagatggagagaggagaggagaca
gagatggagagagagaaggagagagagatggagagaggagaggagacagagatggagaga
gaggagagagggaaggagatagagaaggagatacagatggagacagagatgaaggagaga
cggaaggagatagagattgagagaggagaggagacagagatggagagagggaagaaggtg
ggagagtctaagagaagaccgttctgggtggaagacaatgatctgcctccaatgatgttg
agcaggagagtgtctaagatgtctgaggagttggagagcataagtataattaacatgcac
agcgaggaagagggggcgggactacttcagcctctcggccaatcacgatatgacggcatg
caggaacagtacaccaatcaccaggaggaggaggaatggcaagacgacctagcccggtgg
aagagtcgtcgccgcagtgcttctcaggatctgatcaggaaagaggaggagaggaagcgg
atggagaggatgatgaaggaggaggagggaggccacacccagaagaagaacatcaagacg
tacagagagatcgtagaggacaaagagcgtagggaggcggagctgtgtgatgcgtacagg
agggcgggctctaaagcggaagctgccatggttctccagcgttacgctctccgcttcacc
atcagtgattcaacgctggacagtctgcagctacctagaaccattactactgaccagaac
cctgattctagaacacctgctaccaaccagaaccctgagtttagaaccactactaccaac
cagaaccttgagtctagaaccattactaccaaccagaaccctgagtctaaaaccatcact
actgaccagaaccctgagtctagaaccattactactgaccagaaccctaaccctagaacc
agtattaataaccagaactctgagtctacaaccattactactgaccagaactctgagtct
acaaccattactactgaccagaacccagagtctagaaccattactactgaccagaacctt
gagtctagaaccattagtactgaccagaaccctaagtctagaaccattacctctgaccag
aaccctgagtctagaaccattactactgaccagaaccctaaccctagaaccattattact
aaccagaaccctgagtctagaaccattactgctgaccagaaccctgagtctagaaccatt
acccctgaccagaaccctgagtctagaaccattattactgaccagaaccctgagtctaga
agcataattactaaccagaaccctgagtctagaaccattactgctgactacaaccccgac
tctgaccctgacaacccagaacgagctggaaacggactagaggccctgcagactgacaca
aagcaagagccccgagcccccccccaaaaacaaatctctgtcacacacacccaacacaca
cagctccaaacccaaaacacccaacacacccaacacacgcacacacaaaaccactccaca
caaagtcagcacacactcccccctcccatctccccccctcccggcccctccctcgtagat
ggcttggtgagggtgaatggagagactctcccgtcctccccgccttcctcagcccttcaa
tccccctcctcacccattcactcccccccacccaccgaacaccctggtgccaatcagaag
acacaggtgtcggccgtcagcgccctgattggagggaggaactgtgttgtcacgacgacc
atcgtgacggaactcacccagacacacctgcagccacgtccgttagatatgatcagcaac
aaacaggtgaacggctccatggcattgtcaaggagatcaggggaggaggcggggtctgac
tcttcattgcttagtaaccagcacacctactcatcctcggtgacagaaggactggagggg
agcagtgggacaatggagagccccatgttgaacctggctaagcgtgtagatcactgggtg
tggaaccctgaggatgagagaagacgacaggagaagtggcagcaggagcaggagagattc
ctacaggagcagtacctcagggagcaggataaactgaaaggggagtgggagagagcgcag
agagaggtggacgaggaagaacgaagacacaatgaagaggagaagaagatcctggaggag
acggcaacggccctttctcatccacctcccacagagctcgctgttcagacagaagtgatc
gttccggcacaacagatctatgcatcatgggactgtgagtcatccaggggtcaggagacg
tctctggaccgcaaccagccctgcgccgtcaagaggtcaggatcgtatgagggcccacag
ccaccttcatcatccccatcatcacctcaaccgccctcccccagcaggtgtgtgagtggt
aagcgtcagtgttcaggttgcaatcaggcgctggggaaaggaacagctatgaatatcgac
acgctgggcctgtacttccacctaacctgctttaagtgtggagtgtgtaaggtacagcta
ggtgacaccagttcaggaacagacgttaggatccgtaacgggctgctgagctgtcacgac
tgctatgccacatcacacgcagttggccagccgactacgctgtga
DBGET
integrated database retrieval system
