Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419358
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Entry
139419358 CDS
T10872
Name
(RefSeq) protein MTSS 1-like
KO
K20128
metastasis suppressor protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139419358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139419358
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139419358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
WH2
VPS15-like_hel
Motif
Other DBs
NCBI-GeneID:
139419358
NCBI-ProteinID:
XP_071025402
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Position
2:1235648..1348195
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AA seq
802 aa
AA seq
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MESVIEKECSALGGLFQSVIGDMKNSYPVWEDFISKAGKLQSQLRATVVAAAAFLDAFQK
VADLATNTRGGTRDIGSALTRMCMRHRSIEAKLRDFSMAFMDCMINPLQDQMEEWRRGTN
TLDKDHAKEYKRVRSEIKKKSLDTLKLQKKAKKGRGDVQPQLNSAMQDVSDKYLLLEETE
KQAVRKALVEERSRLCTFVSMLRPVVDEEISMLGEVTHLQTISDDLKMLTMDPHKLPPAS
EQVILDLKGSDYNWSYQTPPSSPSTTRSRKSSMCSSLNSVNSSDSRSSGTSHSHSPSSSS
CSSHYGYRSSTLPQQAAARLSSMSSHDSGFISQPDTYTSKSPSPMPQETLPQLSNGYDHY
GDHHHSDSSYLMGGGSGLGGSYLMGGGSGLVGSYPLFPPSSHSTSITSSSSSCPSQSWSR
PGSALLPDYPHYCTLGPNMVPTSKVPSWKDWAKPGPYDQPMVNTLRRRKDKDPVPAETSY
APLPLLVGVIPAPGGRSLPLPAGVIPAPGGRSLPLPAGVIPAPGSRSQPLPPPPKVCEME
AHEELALALSRGLQLDSHTQRSSRDSLHCSSGYSTQSTTPCCSEDTIPSQVSDYDYFSMG
GDQEVDQQEFDKSSTIPRNSDISQSYRRMFQSKRPASTAGLPSTAGSVIMTPGVATIRRT
PSTKPSARRGTTGPIPIRTPVIPVKIPTVPGLFGGGFPGGLGIPGGPGVGLEEPEEAQSP
ESPAQGEEGELGVLPLAFWSGQATTNPPLAPHQPRVQCQGEGGSLEEGEVMDGQGGNMLL
VIQRGVKLKRTNTNDRSAPRIV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgttattgagaaggaatgcagtgcactggggggacttttccagagtgtgata
ggcgacatgaaaaacagctaccccgtctgggaagactttatcagcaaggctgggaaacta
caatctcaactcagggcgaccgtggttgcagctgcagcgttcctggatgcctttcagaaa
gtggctgacctggccaccaacacacgaggaggcaccagggacattggttcagctctaacc
aggatgtgtatgagacacagaagcatcgaggccaagctcagagacttttcaatggctttc
atggactgcatgatcaaccctctacaggatcagatggaggagtggaggagaggaaccaac
actctggataaggaccatgctaaagagtacaagagagttcggagtgagatcaagaagaag
tctttagacactctgaagctacagaagaaggcaaagaaagggcgaggagacgtccagccc
cagctgaacagtgccatgcaggacgtcagtgataaatacctgttgctggaggagacggag
aaacaggccgtcaggaaggccctcgtcgaggaaaggagcaggttgtgcaccttcgtctcc
atgctacgacctgtcgtggatgaggagatctccatgctaggagaggtcacccacctccag
accatatctgacgacctcaagatgctgaccatggaccctcacaagctgccccccgccagc
gaacaggtgattctggatctgaaaggctctgactataactggtcctatcagactcctccc
tcctcccccagcaccactaggtccaggaagtccagtatgtgcagcagtctgaacagcgta
aacagtagtgactctcgctccagcggcacatcccactctcactccccttcctcctcctcc
tgctcctcccactacggctaccgtagctccaccctgccccagcaggccgcggcacgactg
tcttccatgtcctcccatgactcaggattcatctcccagccagacacctacacctccaag
tcaccatcacccatgccccaggaaacactgccgcagttgtctaacgggtatgaccactac
ggggatcaccatcattcagactcttcatacctgatgggagggggctcaggcctggggggg
tcctacctgatgggagggggctcaggcctggtgggttcctaccccctcttccctccctcc
tcccattccacctccatcacctcctcctcctcctcctgtccgtcccagtcgtggtccagg
ccgggctcggccctgctacctgactaccctcattactgcaccctggggcctaacatggtc
cccacctctaaagtccccagctggaaggactgggctaaaccaggaccctatgaccagccc
atggtgaacacccttagaaggaggaaggacaaggatcctgtaccagcagaaaccagctat
gccccactaccactgcttgttggtgtcatcccagcacctgggggcaggagtctaccactg
cctgctggtgtcatcccagcacctgggggcaggagtctaccactgcctgctggagtcatc
ccagcaccagggagcaggagtcaaccattacctccaccacccaaggtgtgtgagatggag
gcccatgaggagctggctctggccctgtccagaggtctacagctggactcacacacacag
cgttccagtagggactctctacactgttctagtggctacagtacccagagtaccaccccg
tgctgttcagaggacaccataccttcacaagtgtcagactatgactatttctcaatggga
ggggaccaggaggttgaccagcaggagtttgacaagtcatccaccatcccccgtaacagt
gacatcagccagtcctaccgtaggatgttccagtccaagagaccagcctccaccgccggc
ctaccttctacggctggctccgtcatcatgaccccaggggtcgccaccatccgccgcacg
ccctccaccaagccttcggctcgccgcgggaccaccggccccatccccatccggaccccc
gtcatcccagtcaagatccccaccgtgcctggcctatttgggggaggattccctgggggg
ctggggatccctggaggaccaggagtagggctggaggaaccagaggaggcccagagccct
gagtctccagcccagggagaggagggggagctgggtgtacttcccctggcgttctggagt
ggtcaagcaaccacaaaccctcccttggcccctcaccagcctagggtccagtgtcagggc
gagggggggtccctggaggagggggaggttatggatggtcaggggggaaacatgctgctg
gttatccagagaggggtcaagctgaagaggaccaataccaacgatcgctcagcaccgcgc
atcgtataa
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