Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419382
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Entry
139419382 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: stAR-related lipid transfer protein 13-like
KO
K20632
deleted in liver cancer protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139419382
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139419382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Motif
Other DBs
NCBI-GeneID:
139419382
NCBI-ProteinID:
XP_071025428
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Position
10:complement(3559840..3602100)
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AA seq
1083 aa
AA seq
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MTTKRKSAKLQLRRSISEQLRDSTSKAWDLLWRNVRERRLAEIEAKEACDWLRAAGFPQY
AQFYEDSQFPVDISSVSRDHVFLDRDLVEPLCRRLNTLNKCCSMKLDVNRPRKKTDDSDE
DPLAISKRWTFEWNSRRWSRLQDMHFLLGSPNESNPEGCQGEGEGLLRSTVSSESVLTDI
SEPEITDISSLYSQESLGAMLPDSVSMASLVGPYQPPRDMSHYNSLPIKSSRHGQGGRGP
AKSFLRRMEMMRTWGPSFRRKTGSGRALVISGPVLQGQDPQALQTLHCVPINQSDGSPHP
LHQSDNITSPVAHGDGNEGQSETSSVSSMSPSVRQRVSKPRPKRGRVYLEDTELLSGAPH
GRRTEAQQSLFSRNHFHFRSYEDLLVHIPKDHKPGTFPKALSIESLAPVTDHQRQTPSPS
PLYPSQGSPWEGTALSKKPPCPGAPSGSRVSVYDNVPGSHLYASTGDLLDVDRDDHLFPH
LDDIISHVSGLQQIVDHWSRRMLTEGQEGEAGNEEEGGEGERDGVSLNDTDPTGTRERRD
SGVGASLTRPRHRWPSFRLSDRLSQSDSSLQISTQSAVQLSLLKKFSLLRLTAIMEKYST
SNKHGWTWSVPTFLKRMKVEDSREKGVFGVPLIVHTQRCGYPLPLCLQQALSHLRMHCLD
QVGLFRKSGVKSRIQALRQECETSPDSVCYEDQSAYDVADMVKQFFRDLPEPLLTSKLGE
TFLHIYQYVPNEHRLQAVRAAILLMSDENREVLQTLLFFLRDVTSCVEENQMTPMNLAVC
LGPSLFHLNILKNGNLCPRSIQRKYATGRPDQKDLNENLAATQGLSHMITECQHLFEIPQ
ETVSQSPNSYMEAELLAPPLNELCKTYEEEEEGSYHTLMEGLVRGLLKEARDNSKGWVSW
ASTDHTELAFKKVADGNPLRRWRVSVEVCAPPSDVLERLLRQRPLWQTDVLEEKVLETLD
RQTDIYQYSLQSMAPHPNTDYVVLRSWRNDVSKGCSVLVCVSVDQEDSPAQPAVRGVVLE
SHYLLESCGTGRSRLTHICRVDLKGRSPEWYNKAFGHLCVSEAQRIRSSFXTLQTPPGPE
TKN
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaagcgaaagtcagccaagctccagctgcgccggtcgatcagcgagcagctg
cgggactccacgtccaaggcttgggatctactgtggaggaatgtccgggagaggcgcttg
gcagagatcgaggccaaggaggcttgtgattggctaagggctgcagggttcccacagtac
gcccagttctacgaagactcccagtttcctgtagatatctcgtcagtaagtagggaccat
gtcttcttggacagagacctggtcgaaccgctgtgtcgacgtctcaacaccctgaacaag
tgttgctccatgaaactagacgtcaaccgccccaggaagaaaactgatgattcagacgag
gacccgctggccatcagtaagagatggacctttgagtggaacagccggcgctggtcccgc
ctccaggacatgcacttcctgctgggctcgcccaatgagagcaaccctgaggggtgtcag
ggcgagggggagggactcctgcggagcacggtgagcagtgagagcgtcttaacggacatc
agcgaaccagagatcacggatatatcctctctttacagccaagaatctctaggagccatg
ctccctgactcggtctctatggcatcgctggtcgggccctaccagcctccgagggacatg
tcccactacaactctctaccaatcaaaagcagccgtcatggccagggtgggcggggtccg
gcgaagtccttcctgcgtcgcatggagatgatgcgtacgtgggggccgtccttcaggagg
aagacaggaagtggacgggctctggtcatcagtgggccggtcttacaggggcaggatccc
caggcactacagacactccactgtgtccccatcaaccaatcagatggcagtcctcatcct
ctccaccaatcagacaacatcacatcccctgttgcccatggagatggcaacgagggccaa
tcagagacaagcagtgtgagttccatgagtcctagtgtgaggcagagagtctctaagcct
cggcctaaaagaggacgtgtttacctagaagacacggagctgctctctggcgccccccat
ggccggaggactgaagcacaacagagcctgttcagcaggaaccacttccacttccgctca
tacgaggacctgctggtccacatccccaaggaccacaaaccaggcaccttccccaaagcc
ctgtctatagagagcctagcccctgtcaccgaccaccagcgccagaccccctctccctct
ccgctctaccccagtcaaggctccccctgggaaggcacggctctgtccaagaagcctccc
tgtcctggagctccgagtggcagcagggtgagtgtgtatgacaacgtccctgggtctcac
ctttacgcgtccacaggtgacctgctagatgtggaccgagacgatcacctgttcccccac
ctggatgacatcatcagtcacgtcagcggtctgcagcagattgtagaccactggagtcgc
agaatgctgacagagggacaggagggggaggcagggaacgaggaggaggggggagagggt
gagagagacggggtctccctaaatgatacggaccctacagggaccagagagaggagagac
tctggagtgggagcttcccttacgagaccacgtcaccggtggccgagcttccgcctgtct
gaccgtctgagccaatcagactcctcgctacagatcagtacccaatcagctgtccagctc
agcttgctcaagaagttctctctgctccgactcacagccatcatggagaaatactccacg
tctaacaaacatggttggacctggtctgttcctacgtttctgaagcgtatgaaggttgaa
gacagtagagagaagggtgtgtttggggttcccctcatagtacatacacagcgttgtggt
taccctctacccctctgtctacagcaggccctgagtcatctcagaatgcactgccttgac
caggtgggtctgtttcgtaagtccggtgtaaagtcccgtatccaggcgttgagacaggag
tgtgagaccagtcctgacagtgtgtgttacgaggaccagtcagcgtacgacgtagcagac
atggttaaacagtttttcagagaccttccagaacctctactgaccagcaagctgggagag
accttcctacacatctaccagtacgtacctaatgagcacaggttgcaggccgtgagggcg
gccatcttgctgatgtcagacgagaacagggaagtgctccagacactgctcttctttctg
cgcgatgtcacttcctgtgtcgaggagaaccagatgacccctatgaacctggctgtgtgt
ctgggcccctctctgttccatctcaacatactgaagaacggcaacctgtgccccaggtcc
atccagaggaagtatgctactggtcggccagaccagaaggaccttaatgagaaccttgct
gccacacagggcctgtctcacatgatcactgagtgccaacacctgttcgagatcccacag
gagacggtgagccagtctccgaactcctacatggaggctgagttactagcgccccctctg
aacgagctgtgtaagacatacgaggaggaggaggaagggtcctaccacacactcatggag
gggctggtgcggggcctactgaaggaggccagagacaatagtaaaggatgggtgtcctgg
gcctccaccgaccacactgaactggccttcaaaaaggtggctgatggtaaccccctgcgg
cggtggcgtgtatcggtggaggtgtgtgccccgcccagtgatgtgttggagaggctgctg
aggcagcgccccctgtggcagacagacgtactggaggagaaggttctggaaaccctggac
agacagacagacatctaccagtacagcctgcagagcatggcaccacaccccaacactgac
tatgtggtactgaggtcatggcgtaacgatgtgtctaagggttgcagtgtgttggtgtgt
gtgtcagtggaccaggaggacagtccagcccagcctgcagtcagaggagtagttctagag
tcccactaccttctggaatcctgtggaactggcaggtccaggctcacacacatctgcagg
gttgacctgaagggcaggtctccagagtggtataacaaggcctttggtcacctgtgtgtc
tctgaggcccagaggatccgttcctccttcnncaccctacaaacccccccaggacctgag
accaagaactga
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