KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419422
Entry
139419422         CDS       T10872                                 
Name
(RefSeq) interleukin-12 subunit beta-like
  KO
K05425  interleukin 12B
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060  Cytokine-cytokine receptor interaction
ocla04620  Toll-like receptor signaling pathway
ocla04622  RIG-I-like receptor signaling pathway
ocla04625  C-type lectin receptor signaling pathway
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    139419422
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    139419422
   04622 RIG-I-like receptor signaling pathway
    139419422
   04625 C-type lectin receptor signaling pathway
    139419422
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139419422
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139419422
   00536 Glycosaminoglycan binding proteins [BR:ocla00536]
    139419422
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Interleukins
   139419422
Glycosaminoglycan binding proteins [BR:ocla00536]
 Heparan sulfate / Heparin
  Cytokines
   139419422
SSDB
Motif
Pfam: IL12p40_C DUF4945
Other DBs
NCBI-GeneID: 139419422
NCBI-ProteinID: XP_071025470
LinkDB
Position
10:9782056..9786044
AA seq 323 aa
MNMLLHHVLCLILHVVSSSQYETETIETLMPNVKVVKVDLRIFTETQVPLLCGDSYQDTE
VIWMKDSEREGQGNQIQVKVEEMMGANYSCHNAAGDYLNHTLVLVQDIPSPNRTRRILEK
SHDADENEYIRCLAKNYNGTFHCFWKKTTYRTSAVVALVQVGQFSGRNFSCSVHSDGAGL
TCEDLDSCSFAEEVSRIDLTVYFRSNYLLEDYTVTPFYIREIVETDKIHITKVEGNTFQW
GYPATWSLPCSYYPLTFQVKVVHARESCDSEKQLLLKETKETKLTVVHSSKRYRFCLRAK
DELVDRPWCQWTDYEVKHHHKKH
NT seq 972 nt   +upstreamnt  +downstreamnt
atgaacatgttactacaccatgtcctgtgtctcatccttcacgtggtatcaagcagccag
tatgagacagagaccatcgagactctcatgccaaatgtgaaggtggtgaaggtggatctg
aggatcttcactgagacgcaggtccctctgctctgtggggactcctatcaggacacagag
gtgatctggatgaaggacagtgagcgtgaaggacaagggaaccagatccaggtgaaagtt
gaggagatgatgggagcgaactacagctgccacaacgctgctggagactacctcaaccac
actctggtgctggtgcaggacataccatcgcccaacagaacgagacgcatcctggagaag
tcacatgatgcagatgagaatgagtacataagatgtttggcaaaaaattacaatggaaca
tttcattgcttttggaagaagaccacctatcggacgtcagctgttgttgctctggtccaa
gtaggacagttctctggcagaaacttctcctgctccgttcacagtgatggtgcaggtttg
acctgtgaggacctggacagctgttcctttgctgaggaggtgtctcgtatcgacctgacc
gtctacttcaggagcaactacctcctagaggactacaccgttacaccgttctacatacga
gaaatagtggagacagacaagatccacatcaccaaggtggaggggaacacctttcaatgg
gggtaccctgccacgtggagcctcccatgctcttactaccccctcacattccaggtcaaa
gtggtccacgccagggaaagctgtgactctgaaaaacagctccttctaaaggaaaccaaa
gaaacgaagttaaccgtcgttcacagctccaagaggtatcgtttctgcctgcgggcgaag
gatgaactggttgaccgtccctggtgtcagtggaccgattacgaggtaaagcatcaccat
aagaaacattga

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