Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419435
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Entry
139419435 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139419435
04082 Neuroactive ligand signaling
139419435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139419435
Ion channels [BR:
ocla04040
]
Ligand-gated channels
GABA-A
139419435
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139419435
NCBI-ProteinID:
XP_071025484
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All DBs
Position
10:12770318..12850834
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AA seq
524 aa
AA seq
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MAVLRIRTMRYFGVWTFLVIVAVVCAQRVNDPSNMSIVKETVDRLLKGYDIRLRPDFGGP
PVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGHNAVTGVERIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKEAVANNEKMRMDPN
KWLVGNVVQRDDTLYARMKQRDIDAHDSMWEPIFVDDAAIGLGEEKNKMDPHENILLGTI
EIKNEMGASELTLGLSDPRSTMLTYDSSTLQYRKAGLQARHNFGRNTLERHMPQKKNRLR
RHASQLKINIPDLTDVNSIDKWSRMIFPTVFSLFNIIYWLYYVN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttgagaataagaacaatgagatactttggggtttggaccttcctcgtaata
gtggctgtggtctgtgcgcaaagggtcaatgaccctagcaatatgtcaatcgtaaaagaa
acggtggatagactgttgaaaggatatgatattcgcttgaggccagattttggaggtccc
cctgtgggagtggggatgaatatagacatagccagcatagatatggtatctgaagtcaat
atggactatacattgactatgtatttccagcaagcttggcgagacaagcggttatcctac
tcggagattcccctcaatctcaccctggataaccgggtagcggatcagctgtgggtccca
gacacctacttcctaaatgacaagaagtcttttgtccatggtgtcacagtgaaaaacaga
atgattcgactccatccagatggaaccgtgctctatagcctgaggatcaccactacagca
gcttgtatgatggacctgagacgatatccgctggacgaacaaaactgcacactggagata
gagagctatgggtacaccactgatgacatagagttctactggcgaggaggtcataacgct
gtgacgggggtggagagaatagaactaccacagttctccatcgtggaccacaaactcatc
tctaagaatgtcgtcttctctacaggatcctacccccgactctccctcagcttcaagctg
aagaggaacattggctacttcatcctgcagacctacatgccctctatcctgatcaccatc
ctttcctgggtctccttctggatcaactatgacgcttccgctgccagagtggctttggga
atcaccactgtgctgaccatgaccaccatcaacactcacctgcgggagacccttcccaag
atcccctacgtcaaggccattgacatgtatcttatgggttgcttcgtattcgtcttcctg
gccctgctagagtacgccttggtcaactacatcttcttcggcagaggaccccagcgccag
aagagagcggctgagaaagaagctgtcgccaacaatgagaaaatgagaatggatccaaac
aagtggttggtgggaaatgtagttcagagagacgatactctgtatgccagaatgaaacag
agggatattgacgctcatgactcgatgtgggaaccaatctttgtggacgatgcagcgata
ggactaggcgaggaaaagaataagatggacccacatgaaaatattctactgggcactata
gaaattaagaatgagatgggagcatcggagctgacccttggtctcagtgaccccaggagc
accatgttgacttatgacagctccaccctgcagtaccgcaaagcagggctgcaggccagg
cacaactttggacgcaacaccctggagcgccacatgcctcagaagaagaaccggctacgg
aggcatgcttcacagctgaagatcaacattcccgatttgactgatgtaaactctatcgac
aagtggtcgagaatgatcttccccactgtcttttctttgttcaacataatctattggctc
tactacgtcaactaa
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