Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419467
Help
Entry
139419467 CDS
T10872
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139419467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139419467
04090 CD molecules [BR:
ocla04090
]
139419467
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139419467
CD molecules [BR:
ocla04090
]
Proteins
139419467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
C2-set_3
C1-set
Lep_receptor_Ig
LapA_dom
DUF6476
V-set_CD47
DUF4690
Motif
Other DBs
NCBI-GeneID:
139419467
NCBI-ProteinID:
XP_071025518
LinkDB
All DBs
Position
10:21022715..21033886
Genome browser
AA seq
426 aa
AA seq
DB search
MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCHIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPTTVSRWPGTQVSTE
KPTATALDWPNTKRSPASTPDSQLSTHSQPAHSVFEATGYTLANDSSSNSTSTTGIFDET
ERQRGNGSSAPLLIFLVTCLILGLLVVVAFFVIKLRRAHILWKKENEDSDQSVESSRSKS
SNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTTTNTKTEEAPEIQVIPQTDGATLSPQ
IKETEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggttccgttgcagtg
caacatatgaccgtgatggagggtgagactctaactattaagtgtcacattagaaatgct
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcgagaacctctcattgg
ccaagtacagaaggtccaacaacagtctcccgttggcctggtacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatacaaagcgttcaccagcatcaacccct
gactcacaactcagcactcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagtagcaactcaaccagtactacaggaatcttcgatgagacg
gagaggcagagaggaaatggaagcagtgcgccgttgctcatcttcctcgtgacgtgcctc
atccttggtctgctggtggtcgttgcattctttgtaatcaagctgaggagggctcacata
ctctggaagaaagaaaatgaagactcggatcaatctgtggagagcagcagatcaaaatca
agcaatgaagagaaacaatccagaagaaggggaaatggactttttaacattggattcaca
aagtatgtcgttgaggaaccaatggcaacagagacgacaacaacaacaaacaccaaaaca
gaagaggctcctgaaattcaagtcatcccacaaacagatggagcaaccctaagccctcag
atcaaggagacggaactgtaa
DBGET
integrated database retrieval system
