Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419508
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Entry
139419508 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-10-like
KO
K04811
nicotinic acetylcholine receptor alpha-10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139419508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139419508
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139419508
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139419508
NCBI-ProteinID:
XP_071025568
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Position
10:33470041..33490928
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AA seq
585 aa
AA seq
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MHLWRVFSTWLFFLCFSFLPVCLGAHGRYAQKLLTDLFANYTNALRPVEDTDHIINVTLQ
ITLSQIIDMDERNQILTTYLWIRMVWTDAYLTWKKEDYDGLDTIRIPSSYVWRPDIVLYN
NADDQFSSSMETNVVIRNDGQIMWDQPAISKSSCSVDVSFFPFDAQQCRLTFGSWTHNGN
QMDLVNALDSADLADFVANVEWEVLGMPAKKNVILYGCCSDPYPDITYTLHLKRRASFYI
FNLLIPCMMISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLLVAESMPPSENVPLIGK
YYIATMTMITASTALTIFIMNIHHCGPEARPVPEWARRFILHYLARICFVFEVGENCFTG
TPKKQAPPEPPPDHNINPQTRGTNWDVNGQAWGGMEGRGEEEVGGVGIKTPEEKEEGNRL
DVKKGSYQMFEPSRWKDDLFVSIDAEEEEEGAAGREKGEVGEAEREKCFRGKIGCMGGAE
EKKGKGGGGGERGCVEGGGERRKGSLGGAEDRGRREVVVSVQCVCQHQELRRNIEYIASC
YHDQRSTQRRTGEWRKVAKVMDRLFMWLFFIMVFLMSLLIMGKAV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatggagagtcttttctacgtggctattcttcctctgttttagttttcttcca
gtgtgtctgggtgctcatgggagatatgctcagaagttgttgactgatttgttcgctaac
tacaccaacgctctgagaccggtagaggacacagaccacatcatcaacgtcacactgcag
atcaccctctcacagatcattgacatggatgagcggaaccagatcctgaccacgtacctg
tggatccggatggtgtggacggacgcctacctcacttggaagaaggaggactacgatggt
ctcgataccatccgcatacctagtagttatgtatggaggcctgatattgtcctatataac
aatgctgatgaccagttctccagctctatggagaccaacgtggtgatccgtaacgacgga
cagatcatgtgggaccagccggccatcagtaagagctcgtgctccgtggatgtgtccttc
ttcccatttgatgcccagcagtgtcgcctaaccttcggctcctggacacacaacggcaac
cagatggacctggtcaacgccctagacagcgctgacctggccgactttgtggccaacgta
gagtgggaggttctgggtatgccagccaagaagaacgtgatcctgtatggctgctgctca
gacccctacccagacatcacctacaccctgcacctgaaacgcagggcctccttctacatc
ttcaacctactcatcccttgcatgatgatctccttcctggccccgctgggcttctacctg
ccggctgactctggggagaaagtgtccctgggggtcactgtgctgctggccctgaccgtg
ttccagctgctggtggcagagagcatgccaccctcggagaacgtaccactcatagggaag
tactacattgctaccatgacgatgatcaccgcatcgaccgccctgactatcttcatcatg
aatatccatcactgtggtccggaggcgcgtcccgtccctgaatgggcccgccgcttcatc
ctgcactacctggcacggatctgcttcgtcttcgaggtgggagagaactgcttcactgga
acccccaagaaacaggccccgcctgagcccccacccgaccataatatcaacccccaaact
agaggtactaactgggatgtgaacgggcaggcctgggggggcatggaagggaggggtgaa
gaggaagtgggaggggtgggcataaagactccggaagagaaagaggaggggaatagactg
gatgtgaagaaagggtcataccaaatgtttgagcccagtaggtggaaagacgacctgttt
gtaagtatagatgcagaagaggaggaggagggagcagcaggaagggagaagggagaagta
ggagaggcagaaagagagaagtgtttcagaggaaaaattgggtgcatgggaggggcagag
gaaaaaaaaggcaaaggtggaggaggaggagagagaggctgtgtggaaggaggaggtgaa
agaaggaaaggatcattaggaggtgcagaggataggggtaggagggaggtggtggtgagc
gtccagtgtgtgtgtcagcaccaggagctccgcaggaacatagagtacatcgccagctgc
tatcatgaccagcgttccactcagagacgtacgggtgagtggaggaaggtggccaaggtc
atggaccgactcttcatgtggctcttctttatcatggtcttcctcatgagcctcctcatt
atgggcaaggccgtctga
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