Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419593
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Entry
139419593 CDS
T10872
Name
(RefSeq) actin-binding protein WASF3-like isoform X1
KO
K06083
WAS protein family, member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139419593
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139419593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139419593
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
139419593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCAR_helical
WH2
GBR2_CC
Motif
Other DBs
NCBI-GeneID:
139419593
NCBI-ProteinID:
XP_071025667
LinkDB
All DBs
Position
10:45848929..45855480
Genome browser
AA seq
473 aa
AA seq
DB search
MPLVKRNIEPRHLCRGGLPEGIGSELECVTNNTLSAIIRQLSSLSKHAEDVFGELFSEAN
TFYVRANGLQDRIDRLAVKVTQLDSTVEEVSLQDINMRKAFKSSTVQDQQVVSKSSTSNP
VEDMYNTSDKPPSLSILSAYRDDHTDGMKFYTDPSYFFDLWKEKMLQDTEDKRKERRRQR
EQKRCVDGTLQREVKKVRKARNRRQEWNMMAFDKELRPDHRHPHSLHRGVSSEGSLSPES
RYGHDLPDYPTAPGLPHSASNHALAHPYPPADIHESVEHEYHSIGVSYREGTLNRTHHSP
PLHRSTERINGTMTLPPADYSIMEYYASSGPPPPPPAPLIPSAQTAFGSPMVSPTPLTGP
RTGATGYGLPPLPPPGPRMIPPPPGPPPPPVPPAPPQLAGLCDGKRQDTQPRSDLLSAIR
MGIQLKKVQEQQEQQAKREPVGNDVATILSRRIAVEYSDSEDDSELEENDWSD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggtcaagaggaacatagagccccggcacctctgtcgaggggggctgcccgag
gggattggcagtgagctggagtgtgtcaccaacaacaccctctctgccatcatacgccag
ctcagcagtctaagtaaacatgcggaggacgtctttggagagctttttagtgaggctaac
acattttatgtgcgtgccaacggtctccaagaccgcatcgaccgcttggctgtcaaggtc
acccagctggattccactgtggaggaggtctctctgcaggacatcaacatgcgcaaggca
tttaaaagctctacagtccaggaccagcaggtggtgtccaagagcagcacgtccaaccct
gtggaggacatgtacaacaccagcgacaagcctccttctctcagcattctctctgcttac
agagatgaccacaccgatgggatgaagttctacacggacccatcctacttctttgacctg
tggaaggagaagatgctgcaggacacagaggacaagaggaaggagagaagaagacaacgc
gagcagaagcgatgtgttgacggcacacttcagcgcgaggtgaagaaggttcgtaaagcc
agaaaccgccgtcaggagtggaacatgatggcgttcgacaaagagctccgcccagaccac
cgccaccctcactctctccaccggggggtgtcgtctgagggctccctctccccagagagc
agatatggtcatgacctgccagactacccaactgctccaggccttccacattctgcatcc
aaccatgccctggctcacccttacccgcctgcagacattcacgagtctgtagagcatgag
taccacagcatcggagtcagttacagagaagggactctcaaccgcacacaccactcccca
cctctgcatcgctccactgagagaataaatggcactatgacgcttccacctgcggactac
agtataatggagtactatgccagttccggaccaccaccccctcccccagcccctcttatc
ccatccgcacagacagcctttggctctcccatggtatcccccaccccccttactggacct
aggacaggggccacaggctatggtctcccacccctacctcccccaggacctcgtatgatt
ccacctcccccaggtccccctccaccaccagtaccccctgccccaccccaactggcagga
ctctgtgacgggaagagacaggacacccagcctcgaagtgaccttctgtcagctattcgc
atgggcatccagttgaaaaaggtgcaggagcagcaggagcagcaggctaagcgggagcct
gtggggaacgatgtggccaccatcctgtcccgtcgcatcgcagtggagtacagcgactcg
gaggatgactccgaactggaagagaacgactggtccgactga
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