Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419612
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Entry
139419612 CDS
T10872
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139419612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139419612
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139419612
Endosome - Golgi transport
Arf GTPase associated proteins
139419612
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139419612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
DUF7573
Motif
Other DBs
NCBI-GeneID:
139419612
NCBI-ProteinID:
XP_071025692
LinkDB
All DBs
Position
10:48277293..48288879
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AA seq
1019 aa
AA seq
DB search
MSVPLGPDMPVPVPKPRARYKRAGGSLQSQLSSERDFLCDTPDSAASTGNPSKGGPPTND
LLVESEDNHAIILNKPPFSPAIPSPANENQSQHNFPLSRSDSGVTLSCPLLGSKDPDGLH
DRSAWSSNPPYRSAADYDPYITVVADWAKDLGSESSDDDAVTGEIKNPSQMNNVVSRQVG
VVPNGETPQPPVEQASMQTRPIKQKTPRAATIRVSRRKQAAASGGGAQIAESSRRESVVS
RSSWLDVWKGRRHNVLWATLDGQLVSLWKKRTDKFTDIVFQVSSITDVRKQEKGRFSVYF
SKKHFEFMAHNKEVQEGWVTSLLASRGREPPVPPEQHGALTMKGPRNNRVYAAICGHNLW
IYNNKEDFQLGVGMTFVSMNVASVKQTGRHSFSLITPYKTFNFSTDSLRELGVWLESLTQ
VIRSALSCSEVAERLWASPWNKVCADCGCANPEWASVNLLVVICEACAGQHRSLGMHVSK
VRSLKLDIKVWTEPLILLFVHYGNKAANDVWAHNVPGAEQILPDSSVDQRGEFIRAKYTK
GRYRRTHPLASSQNLLNKRLCEIVCGPNVPETMSLLCSGARVLCHSGDPHCSSPISLAER
AGQAMQTELLRHNEYTEPPAYAHQKPSRDPATSVPLSAAGEELHGKLEEDRFLFSQENDS
ATCDVLDLREVISIFDCSNGPTHAFEMVTLTDQLLCSSDTEDGLLIHLLHILKVVLPGPI
EEELDRGFAMSRVSLREGGGLQHNEVWAVLRGGQVLIYPTDQQRHRERLTLNLETQYKID
SSENTIELVTGERTMSMQFERDHSCQSWHSLLKRAVTTERKLYQLPPNAIGNVPPAIERC
ISHITQYGLKVDGLYRRCGLATKISCLVEALSSSPTTTPLETDEEGLLDAAGALKQYVRQ
QVVLIPKTHRKLWVEAAAHTEETFRLTTYRGLLKKLPPDNRITLNALCGHFYIVQQYSAE
NRMTAQNLALVFVPTLFQELAMNTDMVQLTRELIIHYTLLFLGKEEESDMESEELITKF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccccctcggtccagacatgcctgtgccagtacctaaaccacgggcacggtac
aagcgggctggcgggagcttacagagccagctctcttctgagagagattttctatgtgat
acacctgattcagcggcaagtacaggaaatcctagcaaaggtggtccacccacaaatgat
ttgctggtagaaagtgaagacaaccatgccattatcctaaataaacctccgttcagccct
gccatccccagcccggctaatgagaatcaaagccagcataacttccctctctccagatct
gattctggagtgactctgtcttgcccattattgggtagtaaggatccagatgggctccac
gacagatctgcctggtcatccaaccctccataccgttctgctgcagattatgacccctat
attactgtagtagctgactgggcaaaagaccttggatcggaatcttccgatgatgatgcc
gttactggagaaataaagaacccatctcagatgaacaatgtggtgtcaaggcaggttggt
gttgtccccaatggagaaacccctcagcctcctgtggaacaggcgtctatgcagaccaga
ccaatcaaacaaaagaccccacgtgctgccaccatccgcgtcagcaggagaaagcaggca
gcagcgagcggtggtggtgcccagatagcagagtcctctcgtagggagagtgttgtgtcc
agatccagctggctggatgtatggaagggacgcaggcacaatgttctgtgggccaccctg
gatggacagttggtatcactatggaagaaacgcacagacaagttcacagacatagtgttc
caagtgtcaagcatcaccgacgtccgtaagcaggagaaaggacgcttctccgtttacttc
agcaagaaacactttgagttcatggcacacaacaaagaggtgcaggagggctgggtgact
tcccttctggcttctcgtgggcgggaacccccagtccctccggagcagcatggagccctg
accatgaagggccctcgcaacaacagagtgtacgctgccatctgtggacacaacctatgg
atctacaacaataaagaggacttccagttgggggttgggatgacctttgtgtccatgaac
gtggcgtcagtgaagcagactggccgtcatagcttcagcctcatcacaccgtacaaaacc
ttcaatttctccacagactcattgagggagctgggcgtgtggctggagagcctgacccag
gtgatccgcagtgccctgtcatgcagcgaggtggccgagcgactctgggccagcccatgg
aacaaagtgtgtgccgactgtggctgtgccaaccctgagtgggcctcagtcaacctgcta
gtggtcatctgtgaggcttgtgcaggccagcatcggtctttgggcatgcatgtgtccaaa
gtgagaagcctgaagttggacattaaagtgtggaccgaacctctgattctgctctttgtc
cattatgggaacaaagcagccaatgatgtgtgggctcacaacgtgccgggtgcagagcag
atcctgccggactcctctgtggatcagaggggggagttcattagggccaagtacaccaaa
ggtcgatacagacggacccatccgttagcctccagccagaacctgctcaacaagaggctg
tgtgagatagtgtgtggccctaacgtcccagagaccatgtccctgctgtgctcgggggcg
cgggtcctgtgccactcaggggaccctcattgctcctcacccatctcactggcagagcgg
gctggacaggccatgcagactgagctcctcagacacaacgagtacacagagccccctgcc
tatgctcatcagaagcccagcagagaccctgctacctctgtccccttgtctgctgcagga
gaggagctccatgggaagttggaggaggaccgcttcctgttctcccaggagaacgactct
gctacctgtgatgttctggacctgagggaggtcatctccatcttcgactgctccaacgga
ccaactcatgcatttgagatggtgaccctgacggaccagttgctgtgcagttctgataca
gaagatggtttactcatacaccttctccatattctcaaggtggtgttgcccgggcccata
gaggaggagctggacagggggtttgctatgtcccgggtgtctctgagggagggaggaggc
ctgcagcacaacgaggtctgggcagtgctccgtggaggtcaggtcctcatctatcctact
gaccagcagcgccacagagaaaggctaacactcaacctcgagacgcaatacaagatagat
tcctctgagaacaccatagagctggtcactggagagagaacaatgtccatgcagtttgaa
cgagaccacagctgtcagtcctggcacagcttactgaaacgggcagtgaccacagagagg
aaactgtaccagctgccccccaacgcgattggcaatgtgccccctgccatcgagaggtgt
atctcacacatcacacaatatggtttaaaggtggatgggctgtaccggcgctgtggcttg
gccacaaagatcagttgtctggtggaggccctcagcagttcacctacaactacacctctg
gagacagacgaagagggtctcctggacgctgcgggggccctgaagcagtatgtccgccag
caggtggtgctcatccccaaaacacacaggaaactgtgggtggaggccgcagctcacaca
gaagagacctttagactgactacataccgcggactactgaagaagctgccccctgacaat
agaatcacactcaacgccctctgcggacacttctacatagttcagcagtatagtgcagag
aaccgtatgacagctcagaacctggcactggtgtttgtccccacactattccaggagctg
gccatgaacactgacatggtgcagctcaccagagagctcattatccactacacactcctc
ttcctgggtaaagaagaggagtctgacatggagagtgaagaactaataactaagttttga
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