Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139419730
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Entry
139419730 CDS
T10872
Name
(RefSeq) ras-related protein Rab-33B-like isoform X1
KO
K07920
Ras-related protein Rab-33B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139419730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139419730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139419730
04031 GTP-binding proteins [BR:
ocla04031
]
139419730
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
139419730
Others
Specific organelles associated proteins
Auto phagosome
139419730
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139419730
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
139419730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
SRPRB
PduV-EutP
Septin
GpA_nuclease
AAA_24
Motif
Other DBs
NCBI-GeneID:
139419730
NCBI-ProteinID:
XP_071025823
LinkDB
All DBs
Position
10:73307315..73325757
Genome browser
AA seq
268 aa
AA seq
DB search
MESSLEFSNSFTSVSSPSARCRIFKIIVIGDSGVGKTCLTYRFCAGEFLDRTEATIGVDF
RESLVEVEGEKIKEDREDGGERTQELQLWDTAGQERFRKSMVQQYYRNVHAVLFIYDVTR
PDSFRGLPAWIEECRRYSLGQEITRFLVGNKSDLRDTCSCDPRSIKVEGQVTRDQAQKFA
VAHGMILFETSAKSLPGGGGESGGGHQDSVEDVFMALASRLKRQTRPPPPVLNNTGVSGS
YCGSYTGTSSFRLPAKKNPQKDFWTCTC
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatccctggagttctcaaactctttcaccagtgtgtcttcgccctccgcgcgg
tgtcggatcttcaagatcatcgtgatcggagactccggtgtcggtaagacctgtctcacc
taccggttctgtgccggtgagttcctcgaccgaaccgaagccaccatcggtgtcgatttc
cgtgagagcttggtcgaggtcgaaggcgagaaaatcaaggaggacagagaggatggagga
gagaggacgcaggagctccagctatgggacacggcgggccaggagcgtttcaggaagtcg
atggtccagcagtactatcggaacgttcatgctgttctcttcatctacgacgtcaccaga
ccagacagcttcagaggcctgccagcctggatagaggagtgtagacggtactcactggga
caggagataaccaggttcctcgtgggcaacaagagcgacctccgtgacacctgcagctgt
gacccccgctccatcaaggtcgaaggtcaggtgacacgggatcaggcccagaagtttgca
gttgcccacgggatgattctgtttgaaacgtctgctaaaagcctccctggaggaggagga
gaatcaggaggggggcatcaggacagcgtggaggatgtgttcatggccctggcctccagg
ctgaagagacagaccagaccccctcccccggttctcaacaacacaggagtgtctgggtcc
tattgtgggtcctatacagggacatcttctttcagactgccagccaagaagaaccctcag
aaagacttctggacatgcacctgttga
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integrated database retrieval system
