Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420035
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Entry
139420035 CDS
T10872
Name
(RefSeq) catenin beta-1 isoform X1
KO
K02105
catenin beta 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04510
Focal adhesion
ocla04520
Adherens junction
ocla04916
Melanogenesis
ocla05100
Bacterial invasion of epithelial cells
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139420035
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139420035
04520 Adherens junction
139420035
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139420035
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139420035
05100 Bacterial invasion of epithelial cells
139420035
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT_2
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
Queuosine_synth
Motif
Other DBs
NCBI-GeneID:
139420035
NCBI-ProteinID:
XP_071025926
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Position
2:6900784..6910696
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AA seq
790 aa
AA seq
DB search
MASQSDLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDNQ
VLYEWEQGFSQSFTQDQVSDIDGQYAMTRAQRVRAAMFPETLDEGMQLPSTQFDGAHPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQTTLAEVDVMQEGMEGLLGTLVQLLGS
DDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHL
TSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQG
AIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIR
GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGV
ATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMTWNETGDLGLDIGAQGDALGYRQ
EDPSYRSFHSGGYGQDSMGMDSMMDHDMGAHHPGPEYPVDGLPDLGHAQDLIDGLPPGDS
NQLAWFDTDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtctgatctgatggagctggacatggccatggagcctgaccggaaggct
gcagtgagccactggcagcagcagtcatacctggactctggtatccactcaggggctacc
accaccgccccttccctgagtgggaagggcaacccagaggaggaggatgtggataaccag
gtgctgtacgagtgggagcagggcttctctcagtccttcacacaagaccaagtgtcagac
attgacgggcagtatgccatgaccagagcccagagggtgcgtgcggccatgtttccagag
accctggacgagggcatgcagctcccctccacccagtttgatggggcccaccccaccaac
gtgcaacggctggctgagccctctcagatgctgaagcatgctgtggtgaacctcatcaac
tatcaggatgacgctgagctggccacgcgtgccatccccgagctgaccaaactactcaac
gacgaggaccaggtggtggtgaacaaggctgcagtgatggtgcaccagttgtccaagaag
gaggctagccgccacgccatcatgcgctccccccagatggtgtcggcaatcgtgcgcacc
atgcagaacaccaacgatgtggagacagcccgctgcaccgccggcaccctgcacaacctg
tcccaccacagagagggtctgctggccatctttaagtccgggggcatccccgcccttgtc
aaaatgcttgggtccccagtggactcggtgctgttctacgccatcaccaccctacacaac
ctgctgctccaccaggagggtgccaagatggccgtgcgtctggccgggggcctgcagaaa
atggtggccttgctcaacaagacaaacgtcaaattcctcgccatcacaacagattgcctt
cagattcttgcctacggcaaccaagaaagcaagcttatcatcctggccagcggtgggccc
caggccctggtcaacatcatgaggacatacacatatgaaaagctgttgtggactaccagt
agagttctcaaagtgctctctgtctgctccagcaacaagcctgccatcgtagaggctggt
ggtatgcaggctcttgggcttcacctcacagaccccagtcagagactagtccaaaactgc
ctgtggaccctcaggaacctgtcagacgctgccaccaaacagacgaccttagctgaagta
gatgtgatgcaggagggtatggaaggtctgctggggaccctggtccagctcctgggctct
gatgacatcaacgtggtgacgtgtgctgccggcatactgtccaacctcacctgcaacaac
tacaagaacaagatgatggtgtgtcaggttggggggattgaggcgctggtccgtaccgtg
ctgcgtgccggagaccgcgaggacatcactgagccggccatctgcgccctgcgccacctc
accagccgccaccaggatgctgagatggcccagaatgctgtgcggcttcactacggcctg
cctgtggtggtcaagctgctgcatcccccctcccactggcccctcatcaaggccactgtg
ggcctaatccgtaacctggctctatgtccagccaaccatgcccctctgcgtgagcagggg
gccatccccagactggtgcagctgctggtcagagcccaccaggacacccagagacgcacc
tccatgggaggcacccagcagcagtttgtggagggagttcgtatggaggagatcgtggag
ggctgtactggagctctgcacatcctggctagagacgtccacaacagaatcgtcatcaga
ggactcaacaccattccactctttgttcagctgttgtattctccaattgagaacattcag
cgtgtggctgcaggagttctgtgtgagttggcccaggacaaggaggcagcggaggccatc
gaggctgagggcgccaccgcccccctcacagagctgcttcactccagaaacgagggcgtg
gccacctatgctgctgctgttctgttccgtatgtctgaagacaagccccaggactataag
aagcgtctgtctgtggagctcaccagctccctgttcaggacggagcctatgacctggaac
gagacaggagatctgggcctggacatcggcgctcagggagatgccctgggctaccgtcag
gaagaccctagctatcgctccttccactctgggggatatgggcaggactccatgggtatg
gactccatgatggaccatgacatgggtgcccaccaccccggccctgaatacccagtcgac
gggctgcccgacctgggccacgcccaagacctgatcgatggtcttcccccaggcgacagc
aatcagttggcttggtttgatactgacctgtaa
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