Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139420041
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Entry
139420041 CDS
T10872
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139420041
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139420041
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139420041
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139420041
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139420041
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Type II RPTP family
139420041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
Ig_5
Ig_VEGFR-1-like_5th
DUF5849
MpPF26
Motif
Other DBs
NCBI-GeneID:
139420041
NCBI-ProteinID:
XP_071025931
LinkDB
All DBs
Position
1:complement(9388278..9755610)
Genome browser
AA seq
1919 aa
AA seq
DB search
MAAGGPPCLRLPALLPLSTLLLCMLLTGFHALSPPRFTKVPVDQIGVSGGVVSFVCQATG
DPKPRVSWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENIYECVAENSEGEVNV
NAKLSIIREDLLPGGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPIDPN
TSNGRIKQLRSGALQIENSEETDQGKYECVASNVEGVRYSSPANLYVRVRRVPPRFSIPP
TSHEMMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNSVRESANYTC
VAMSSLGIIEAVAQITVKSLPKPPGTPMVTETTATSVTITWDSGNPDPVSYYIIQYRAKS
PDSKFETMDGITTTRYSIGGLYPNTEYEIRVSAFNTIGQGPPSEPVETRTGEQAPASPPR
NIQARIISQNTMMVRWDEPEEPNGQIKGYRVYYTMDPSQPMSLWQIHNVQDSIITTIQSL
VASETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTKFQVGAVSDTSMELTWEPAFQK
EGIISFELRYKEGSFGSQVTKTFGPTASYVVEGLRANTEYYFSLAAISNKGIGAFTNEIS
QKTLQAKPSAPPQDVKCSSSSSTSLLVSWRPPPVESQNGALAGYLVRYQVVGASVEGASA
GEPMEEPAVLPSDGKVLLQKLEKWTQYSVTLAAFTEIGPGPESEPLLCRTDEDVPGAPPR
RVEVEVLNSTALKVMWRSLLPGRQHGQIRGYQVHYVRVENGESRGLPLIKDVMLADAQWE
TDDTAEYEMVIGGLQSDTTYSITVAAYTTKGDGARSKPKLVVTKGAVPGPPSLSVAQDSE
TSAVVCWDAPDVMIPGMGLQGYRLQFGRKDVSPLASLEFTPQERQYTVASVHRGATYLFK
VQAKSRGGFGEEATAELQVPEHTPQGYPQIRETSNVTCCSVELSWSPPVLAERNGDITEY
TLAYQETGLGGAPRELSLPASQSTYVLNSLKPNSAYDVKIRAHTSVGPGPYSPPIQYRTV
AFETDVPKNFTVKWVTKTTVLLTWKFVERRFPFRCTIEYNRQKMDVDARLTKALVTSLRP
NTTYEFRVTCQENTEGGPRHRVVARTTPPILVKKPKLDLYSEPDNILTMGFAPVETKDIK
DFYVVAVPLKKGLGTARHLKNPDEMDLEELLRDITPKRRTRRQLSQADGKKPYITACFKQ
LPTSFTLGTEHRHSSCESKPLEPGQEYVFFLLAELNTTAVKMFAASPYTDLVVTPELEAD
PLPMETGGDGLIWVVGPVLAVVFIICIVIAILLYKNRKRKESEPRTKCLLNNAEITPHHP
TDPVEMRRINFQTTGMMSHPPIPIAELAEHTDLLKANDNLKLSQEYESIDPGQQFTWEHS
NLEVNKPKNRYANVIAYDHSRVILAPIEGITGSDYINANYIDGYRKQNAYMATQGPLPET
FGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETYGMTQVTLLDTIELATFCV
RTFSLHKVRNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAGPIIAHC
SAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYSFNHDALLEAV
ACGNTEVAARSLFSYIQKLAQVETGEHVTGMELEFKRLANSKAHTSRFISANLPCNKFKN
RLVNIMPYETTRVCLQPIRGLEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMMW
ENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDAR
DGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGV
FTTLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAGLEYLGSFDHYAT
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggcggtccaccctgcctacgtctgccggccctgctgcccctcagcactctg
ttgctctgtatgctgcttactggcttccatgccttatcaccaccaagattcactaaagtt
cccgtagaccagattggcgtatctgggggtgtggtctcattcgtgtgccaggcgacagga
gaccctaagccccgggtgagctggaacaagaaggggaagaaagtcaactcccagcgcatt
gagactatagagttcgatgagggtgccggcgccgtccttcggatccagcctctacgagcg
ccgcgggacgagaacatctatgagtgcgtggcggaaaatagcgagggtgaggtcaacgtt
aacgccaagctgtccataatcagagaggacttgctccctggaggattccccaacatagac
atgggtccccagctgaaggtggtcgagcggacccggacggccaccatgctctgtgctgcc
agcggcaaccccgacccagaaatcacctggtttaaggactttctgcccatagaccccaac
acaagtaacgggcgaatcaaacagctgcgctcaggcgccctgcagattgagaacagcgag
gagacggaccaggggaagtacgagtgtgtggcgtctaacgtggaaggcgtgcgttactca
tcccctgctaacctatatgtgcgagtccgccgtgtgccccctcgcttttctatcccgccg
accagtcacgagatgatgccaggtggcagtgtgaacatcacctgcgtggcggtagggtcg
cccatgccgtacgtcaaatggatgctcaactccgaggacctaacgcccgaagacgagatg
ccagtgggtcggaatgttctggagctcaacagcgtgcgagagtctgccaactatacatgt
gtggccatgagcagtctgggcatcatcgaggcggtggcgcagatcactgtcaagtccctg
cccaagcctccaggcaccccaatggtgaccgagaccacggccaccagtgtcaccatcacc
tgggactcgggcaacccggacccagtgtcctattacatcatccagtaccgcgccaagtct
cccgacagcaagtttgagaccatggacggcatcaccactacgcgatacagcatcgggggc
ctctaccccaacacggagtacgagatccgcgtctcggcctttaacaccatcggccagggt
ccccccagtgagccggtggagacccggaccggggaacaagccccggccagtccgccccgc
aacatccaggcccggatcatctcccagaacaccatgatggtgcgctgggacgagccagag
gagcccaacggacagatcaaagggtaccgggtgtactacaccatggacccgtcccagccc
atgagcctatggcagatccataatgtccaggatagcatcatcaccaccatccagagcctg
gtggcatctgagacctacaccatccgtgtcctggcctttacctcggtgggcgacgggccc
ttctccgaccccatccacgtcaaagtgctgcaaggagtccccggacagccaacaaagttc
caggttggtgctgtgtccgacacaagcatggagttgacctgggaacctgccttccagaaa
gaggggatcatcagctttgaactccggtacaaagagggaagttttggtagccaggtgacc
aaaacttttggccccactgcttcgtacgtcgttgagggtctgcgggcgaacacggagtac
tacttctctctggctgccatttccaacaaaggcattggagccttcaccaacgaaatatcc
cagaaaaccttgcaagccaagccctcagccccccctcaagatgttaagtgcagcagctcc
agctccacctccctgctggtaagttggcgccccccgcctgtggagagccagaatggcgcc
ctggcggggtacctagtgcgctaccaggtggtgggagcctccgttgagggtgccagtgcc
ggggagcccatggaggagccagccgtgctgcccagtgatgggaaggtgctgctgcagaag
ctggagaagtggacccagtacagcgtcaccctggccgccttcactgagattgggccaggc
ccagagagcgagcccctgctctgccgcaccgacgaggatgttcccggagctcctcctagg
cgggtcgaggtggaggtgctcaactccacggcgctcaaggtcatgtggcgctccctgttg
ccggggcgacagcacggccagatccgtggttaccaggtgcactatgtgcgtgtggagaac
ggggagtcgcgcggcctgcccctcatcaaggacgtcatgcttgccgatgcccagtgggaa
acagacgatacagccgaatatgaaatggtcatcggagggctacagtcggacaccacctac
tccattacagtagctgcgtacaccacgaagggagatggagcacgcagcaaacccaaactg
gtggtaaccaaaggagcagtgcctgggccaccctctctgtcggtggctcaggattcagag
acgtcggccgtggtgtgctgggacgcacccgatgttatgatccctggcatggggctgcag
ggttaccggcttcagtttggccgcaaagacgtgtcccccctggctagtctggagttcacc
ccccaggagaggcagtacacggtggctagtgtccaccgcggtgccacctacctcttcaaa
gtccaggccaagagtcgggggggcttcggtgaggaggcgacagccgaactgcaggtgccc
gaacacacaccccaggggtacccccaaatcagagaaacctccaacgtgacttgctgctcg
gtggaattgtcatggtcgcccccggtgctggcagagcgcaacggggatatcacagagtac
acgctagcataccaggagacgggcttggggggcgcgccccgggaactcagcctgcccgca
agccagtccacctacgtgctcaacagcctcaaacccaactcggcgtacgacgtgaaaata
cgcgcacacacgagtgtaggtccagggccctacagcccgccgatccagtatcggacagtg
gcgtttgagacagatgtaccaaagaacttcacggtgaagtgggtaaccaagacaacggtg
ttgctaacatggaagtttgttgagaggcggttcccatttcggtgcacgatcgagtacaac
cgtcagaagatggatgtggatgcccggctgaccaaggcgctggtcaccagccttcggccc
aacaccacctatgagttccgggtcacgtgtcaggagaacacagagggtggccctcgccac
cgtgtagtcgctcggaccacaccgcccatcctggtcaagaagcccaagctggacctctac
tcggagccagacaacattctgaccatgggtttcgccccggtagagaccaaggacatcaag
gacttctatgtggtggcggtaccactaaagaagggtttggggactgcacgacatctcaag
aacccagacgaaatggacttggaagagctgctgagggacatcaccccgaagcgtcgcacc
aggcgtcagctgagccaggcggatggcaagaagccctacatcacagcctgcttcaagcag
ctccccacctcgttcaccctaggcacagagcaccgccacagcagctgtgagagtaaacct
ctggagcccgggcaggaatacgtcttcttcctactggctgagctcaacaccaccgccgtg
aaaatgtttgcggccagcccatacacggacttagtggtgaccccagagctggaggctgat
cctctgcccatggagacaggtggggacggcctcatctgggtggtggggcccgtcctggcc
gtagtcttcatcatctgcatcgtcatcgccatccttctctacaagaaccgcaaacgaaag
gagtcagagcccagaacaaaatgtctgctgaacaacgcagagatcaccccccaccacccc
acagacccagtggagatgagacgcattaacttccagaccacaggtatgatgagtcatccc
cccattcctatcgcggagctggctgaacacacggatcttctcaaagccaacgacaacctg
aaactctcccaggagtatgagtccatcgatccaggccagcagtttacgtgggaacactcc
aacctggaggtgaacaagcctaaaaaccgctacgccaacgtcattgcctacgaccactcc
cgcgtcatcctcgcacccatcgaaggtattactggcagtgattatatcaacgccaactac
atagacggctacaggaagcagaatgcctacatggctacgcagggcccgctgcccgagacg
ttcggggacttctggaggatggtgtgggaacagagggcagccactgtggtcatgatgacc
agactggaagagaaatcacggatcaagtgtgaccagtactggcccagtcgaggcacagag
acctatggtatgacccaggtgactctactggacaccatagagctggccaccttctgtgtt
cgcactttctcgctgcacaaggtacgaaatggctccagtgagaagagggaggtccgtcag
ttccagttcactgcgtggcccgaccacggggtccccgagtaccccacccccttcctggcc
ttcctccgccgggtcaagacctgtaaccccccagacgcaggccccatcatcgcccactgc
agtgcgggcgtgggtaggacgggctgcttcattgtgatcgatgccatgctggagcgtatc
aagcatgagaaaacagtggacatctacggccacgtgaccctgatgcgatcgcagcggaac
tacatggtgcagacggaggaccagtacagcttcaaccacgacgcgttgctggaggcggtg
gcgtgcggcaacacggaggtggcggccaggagcctgttctcctacatccagaagctggcc
caggtggagacgggcgagcacgtcaccggcatggagctggagtttaagcgcctagccaac
tccaaggcccatacgtccaggtttatcagtgccaacctgccctgcaacaagttcaagaac
cgtctggtgaacatcatgccctacgagaccacccgcgtctgcctgcagccaatcaggggc
cttgagggctcagactacattaacgccagcttcatcgacggatacaggcaacagaaggcc
tacatcgcaacgcagggcccgttggcagagaccacagaggacttctggaggatgatgtgg
gagaacaactccactattgtagtcatgctcaccaaactccgagagatgggcagggaaaag
tgtcatcagtactggcccgcagagcgttcggccaggtaccagtactttgtggtggacccc
atggctgagtacaacatgccccagtacatcctccgagagttcaaagtcaccgatgcaagg
gacgggcagtccaggacagtgcggcagttccagttcactgattggccggaacagggggtg
cccaagtcaggagagggcttcatagacttcataggccaggtgcacaaaaccaaggagcag
tttggccaggacggacccatctctgtccactgcagtgcgggggttggccggaccggtgtc
ttcaccacactcagcatcgtgctggagaggatgcgctatgaaggcgtggtagacatcttt
cagacggtcaagatgctgcggacacagaggccggccatggtccagacagaggatgaatat
cagttttgctaccaggcgggtctggagtacctaggaagctttgatcactatgcaacgtaa
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